Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 AL049555.1-201ENST00000562834 1933 ntBASIC4.78□□□□□ -1.64
BHLHE41Q9C0J9 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
BHLHE41Q9C0J9 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 AC104260.2-201ENST00000623551 3497 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 Y_RNA.183-201ENST00000363882 113 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 SNORD27-201ENST00000363981 72 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 RNU6-827P-201ENST00000365553 106 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 RNU6-611P-201ENST00000384276 104 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 Y_RNA.518-201ENST00000384552 113 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 MIR1286-201ENST00000408112 78 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 RN7SKP114-201ENST00000410327 279 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 RAC1P3-201ENST00000416129 580 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 RPS29P9-201ENST00000440360 171 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 AL450023.3-201ENST00000440592 271 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 RPEP5-201ENST00000441137 268 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 AC023424.1-201ENST00000496058 459 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 GZMAP1-201ENST00000503054 631 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 HMGB3P16-201ENST00000508037 287 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 ENPP7P9-201ENST00000514456 627 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 RNU6-182P-201ENST00000516970 105 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 RN7SKP92-201ENST00000517266 244 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 MIR4472-2-201ENST00000582069 67 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 AC008962.1-201ENST00000605729 304 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 AL672167.1-204ENST00000641875 3017 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 AL365440.1-201ENST00000436135 2167 ntBASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
BHLHE41Q9C0J9 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 U3.2-201ENST00000362981 210 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 SNORA73.1-201ENST00000363107 205 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 MIR514A1-201ENST00000385133 98 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 SNORA77-201ENST00000408716 125 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 SNORD56-201ENST00000413522 71 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 C4BPAP1-201ENST00000415474 1893 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 RPL21P38-201ENST00000418090 167 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 AC139712.2-201ENST00000424302 339 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 MTCO1P39-201ENST00000426148 480 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 BX323845.1-201ENST00000432417 179 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 AL354714.3-201ENST00000447284 493 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 AL691482.1-201ENST00000453255 87 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 RPS17P2-201ENST00000461663 408 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 RPS21P4-201ENST00000487122 248 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 RN7SL30P-201ENST00000488416 306 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 RNU6-513P-201ENST00000516104 104 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 RNU4-60P-201ENST00000517239 135 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 AC084851.1-201ENST00000529105 249 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 FAM60BP-201ENST00000578364 658 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 AC073410.2-201ENST00000603240 332 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 MIR8076-201ENST00000611401 83 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 ASNSP1-201ENST00000518311 1939 ntBASIC4.76□□□□□ -1.65
BHLHE41Q9C0J9 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
BHLHE41Q9C0J9 LINC01355-201ENST00000566551 5444 ntBASIC4.75□□□□□ -1.65
BHLHE41Q9C0J9 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BHLHE41Q9C0J9 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BHLHE41Q9C0J9 NEAT1-202ENST00000501122 22743 ntBASIC4.75□□□□□ -1.65
BHLHE41Q9C0J9 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms