Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 NF1P5-201ENST00000588287 448 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 ZNF519P1-201ENST00000449011 1626 ntBASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CNTNAP4Q9C0A0 AC073346.2-201ENST00000624724 2058 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 SNORD3H-201ENST00000384486 214 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 Y_RNA.556-201ENST00000384677 113 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 AL391417.1-201ENST00000404100 426 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 RNU6-1304P-201ENST00000411374 106 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 RPL31P2-201ENST00000413849 377 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 AL591419.1-201ENST00000427423 339 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 snoU13.7-201ENST00000459220 104 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 AL591473.1-201ENST00000464297 313 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 RFPL4AP5-201ENST00000514977 504 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 RPS27AP18-201ENST00000515536 459 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 RNU6-189P-201ENST00000516120 101 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 RNU6-1271P-201ENST00000517049 105 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 AL133153.1-201ENST00000557756 303 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 AC092747.3-201ENST00000603769 301 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 AL451044.1-201ENST00000604867 238 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 PRR13P7-201ENST00000605538 430 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 AC064801.1-201ENST00000612025 407 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 AL590099.1-201ENST00000615276 138 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 MIR7702-201ENST00000621931 59 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 PLCE1P1-201ENST00000622094 305 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 TPTE2P4-201ENST00000258589 1605 ntBASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
CNTNAP4Q9C0A0 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 RNU6-1115P-201ENST00000362490 106 ntBASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 Y_RNA.47-201ENST00000362697 108 ntBASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 SNORD3E-201ENST00000362899 217 ntBASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 Y_RNA.80-201ENST00000362996 102 ntBASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 RNU6-61P-201ENST00000365528 109 ntBASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 RPL7P46-201ENST00000425129 740 ntBASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 AC020550.1-201ENST00000447385 163 ntBASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 RPL7P43-201ENST00000478876 753 ntBASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 RPL30P11-201ENST00000495304 339 ntBASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 AC097473.1-201ENST00000508142 408 ntBASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 HMGN1P28-201ENST00000521340 364 ntBASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 AC135001.1-201ENST00000544546 283 ntBASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 AC024619.4-201ENST00000580924 316 ntBASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 AC010378.1-201ENST00000619270 362 ntBASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNTNAP4Q9C0A0 AL049781.1-201ENST00000623195 3585 ntBASIC5.02□□□□□ -1.61
CNTNAP4Q9C0A0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNTNAP4Q9C0A0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
CNTNAP4Q9C0A0 RNA5SP391-201ENST00000363456 119 ntBASIC5.02□□□□□ -1.61
CNTNAP4Q9C0A0 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNTNAP4Q9C0A0 RNU6-310P-201ENST00000384655 107 ntBASIC5.02□□□□□ -1.61
CNTNAP4Q9C0A0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNTNAP4Q9C0A0 UBE2V1P2-201ENST00000397758 440 ntBASIC5.02□□□□□ -1.61
CNTNAP4Q9C0A0 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.02□□□□□ -1.61
CNTNAP4Q9C0A0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.02□□□□□ -1.61
CNTNAP4Q9C0A0 AC104058.1-201ENST00000448028 297 ntBASIC5.02□□□□□ -1.61
CNTNAP4Q9C0A0 PPIAP3-201ENST00000450588 505 ntBASIC5.02□□□□□ -1.61
CNTNAP4Q9C0A0 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms