Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 RPL17P36-201ENST00000420302 549 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 TXNP5-201ENST00000441043 315 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 RPL34P20-201ENST00000442771 351 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 RPS11P1-201ENST00000451072 473 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AC092754.1-201ENST00000472975 479 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AC010631.1-201ENST00000474150 156 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 CREM-230ENST00000474931 626 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 RPL31P60-201ENST00000478450 367 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 RPL23AP41-201ENST00000484754 458 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 COX6B1P2-201ENST00000489624 230 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AP001025.2-201ENST00000490908 477 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AC112184.1-201ENST00000505179 312 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU7-61P-201ENST00000515897 61 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 RN7SKP67-201ENST00000515905 235 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU2-69P-201ENST00000516061 100 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-191P-201ENST00000516295 94 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 RNU6-1007P-201ENST00000516586 107 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 SCARNA16.4-201ENST00000516956 187 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AC021733.2-201ENST00000518830 497 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AC083923.1-201ENST00000523708 376 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 HMGB1P40-201ENST00000525121 540 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AC011979.2-201ENST00000527568 352 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AC122688.1-201ENST00000541494 223 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AL049779.2-201ENST00000553847 315 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AL391261.3-201ENST00000557194 520 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AL390726.5-202ENST00000564800 256 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 MIR5186-201ENST00000577504 120 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 MIR5696-201ENST00000578474 85 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AC006116.3-201ENST00000592968 361 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 KLKP1-201ENST00000595979 403 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AC105254.2-201ENST00000603636 436 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AC108738.1-201ENST00000603703 237 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 MIR3976-201ENST00000606807 139 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AL161629.2-201ENST00000615347 275 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AC100827.5-201ENST00000615883 426 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 U7.3-201ENST00000616123 62 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AP003789.1-201ENST00000617737 605 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 Y_RNA.788-201ENST00000622394 112 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 NEK3-211ENST00000629912 141 ntTSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AC073869.8-201ENST00000641806 335 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 CCT8P1-201ENST00000413611 1657 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AC103710.2-202ENST00000641454 2853 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 DNM1P47-203ENST00000571780 12667 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 KPNA2P2-201ENST00000419546 1489 ntBASIC1.82□□□□□ -2.12
KRTAP4-3Q9BYR4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AL034546.1-201ENST00000623740 3693 ntBASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP4-3Q9BYR4 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 159.6 ms