Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 FTX_3.1-201ENST00000610451 147 ntBASIC1.69□□□□□ -2.14
UPK3BQ9BT76 SCARNA17.4-201ENST00000614296 143 ntBASIC1.69□□□□□ -2.14
UPK3BQ9BT76 AC005858.4-201ENST00000623191 700 ntBASIC1.69□□□□□ -2.14
UPK3BQ9BT76 MTND1P37-201ENST00000636562 264 ntBASIC1.69□□□□□ -2.14
UPK3BQ9BT76 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.69□□□□□ -2.14
UPK3BQ9BT76 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
UPK3BQ9BT76 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
UPK3BQ9BT76 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
UPK3BQ9BT76 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.68□□□□□ -2.14
UPK3BQ9BT76 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
UPK3BQ9BT76 AL079343.1-201ENST00000572358 1771 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 ELF2P3-201ENST00000445099 1506 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.68□□□□□ -2.14
UPK3BQ9BT76 SNORA63.3-201ENST00000362682 132 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 RNU6-97P-201ENST00000363387 104 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 RNU6-884P-201ENST00000363889 107 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 SNORA23-201ENST00000365128 182 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 Y_RNA.548-201ENST00000384656 105 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 SNORA41-201ENST00000384675 132 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 RN7SKP140-201ENST00000411196 284 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 RNA5SP508-201ENST00000411327 119 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 SEPT2P1-201ENST00000419651 180 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 FCF1P1-201ENST00000432690 571 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 RPS15AP5-201ENST00000436276 388 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC1.68□□□□□ -2.14
UPK3BQ9BT76 ATG12P2-201ENST00000456830 416 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 RPL26P9-201ENST00000457466 433 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 AC107626.1-201ENST00000471084 183 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 RPL36AP51-201ENST00000487216 318 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 AC090255.1-201ENST00000495779 349 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 AC022447.3-201ENST00000506865 495 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.68□□□□□ -2.14
UPK3BQ9BT76 AC234781.5-201ENST00000508429 271 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.68□□□□□ -2.14
UPK3BQ9BT76 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.68□□□□□ -2.14
UPK3BQ9BT76 AP003122.3-201ENST00000526316 255 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.68□□□□□ -2.14
UPK3BQ9BT76 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.68□□□□□ -2.14
UPK3BQ9BT76 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.68□□□□□ -2.14
UPK3BQ9BT76 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.68□□□□□ -2.14
UPK3BQ9BT76 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.68□□□□□ -2.14
UPK3BQ9BT76 AC002545.1-201ENST00000592511 181 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 AP002802.2-201ENST00000605877 235 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 AC103810.6-201ENST00000606708 136 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 HMGB1P24-202ENST00000615653 685 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 AL449363.1-201ENST00000617815 186 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 AL590808.1-201ENST00000618696 141 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 AP000943.4-201ENST00000622912 357 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 AC073592.7-201ENST00000623659 507 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 AP003485.1-201ENST00000625093 753 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 MIR1291-201ENST00000627649 87 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.68□□□□□ -2.14
UPK3BQ9BT76 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
UPK3BQ9BT76 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
UPK3BQ9BT76 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.68□□□□□ -2.14
UPK3BQ9BT76 DDX10P1-201ENST00000448545 1933 ntBASIC1.68□□□□□ -2.14
UPK3BQ9BT76 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
UPK3BQ9BT76 U8.8-201ENST00000365399 135 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 RNU6-359P-201ENST00000365466 108 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 RNU1-52P-201ENST00000384190 164 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 Y_RNA.578-201ENST00000390903 88 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 RNU6-952P-201ENST00000391164 108 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 MIR888-201ENST00000401186 77 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 RNU2-33P-201ENST00000410344 192 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.67□□□□□ -2.14
UPK3BQ9BT76 AL135786.1-201ENST00000415892 214 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 MTCO2P17-201ENST00000424336 677 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.67□□□□□ -2.14
UPK3BQ9BT76 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
UPK3BQ9BT76 MTND1P9-201ENST00000453775 944 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC1.67□□□□□ -2.14
UPK3BQ9BT76 RPL30P9-201ENST00000465586 330 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 RPS20P22-201ENST00000473700 357 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
UPK3BQ9BT76 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.67□□□□□ -2.14
UPK3BQ9BT76 AC022447.1-201ENST00000515358 464 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 NRON-201ENST00000517270 370 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC1.67□□□□□ -2.14
UPK3BQ9BT76 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.67□□□□□ -2.14
UPK3BQ9BT76 AC009063.1-201ENST00000563342 702 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 AC005951.2-201ENST00000576282 495 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 AC008507.2-201ENST00000588402 1176 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.67□□□□□ -2.14
UPK3BQ9BT76 BBIP1P1-201ENST00000602999 279 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 AC136601.2-201ENST00000604356 474 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
UPK3BQ9BT76 AC124016.2-201ENST00000610058 665 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 AC013562.2-201ENST00000611632 603 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 AL445264.1-201ENST00000621719 171 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 AC068057.2-201ENST00000624047 895 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 AC231657.1-201ENST00000624313 397 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 CU459211.1-201ENST00000635667 749 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.67□□□□□ -2.14
UPK3BQ9BT76 AL138713.1-201ENST00000624026 2130 ntBASIC1.67□□□□□ -2.14
UPK3BQ9BT76 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
UPK3BQ9BT76 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
UPK3BQ9BT76 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms