Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 AC007919.1-201ENST00000429380 217 ntBASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 MTND3P21-201ENST00000433774 331 ntBASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 SSXP4-201ENST00000451349 245 ntBASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 AL135752.1-201ENST00000479477 471 ntBASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 RPL21P129-201ENST00000491732 478 ntBASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 RNA5SP471-201ENST00000516971 106 ntBASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 OR5G4P-201ENST00000525251 760 ntBASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 AC022690.1-201ENST00000526681 550 ntBASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 OR4R1P-201ENST00000529879 463 ntBASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 YPEL5P3-201ENST00000547227 352 ntBASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 AC104763.2-201ENST00000604179 382 ntBASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 CR381653.2-201ENST00000624041 768 ntBASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 AC068137.3-201ENST00000639191 341 ntBASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 AC073869.6-201ENST00000640656 341 ntBASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCGF1Q9BSM1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 ZNF680P1-201ENST00000436625 1469 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 CUL1P1-201ENST00000509510 2425 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 RNU6-61P-201ENST00000365528 109 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 RPL17P50-201ENST00000396131 546 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 SOD2P1-201ENST00000396543 562 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 PTMAP2-201ENST00000397627 327 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 HLFP1-201ENST00000402375 499 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 AC092809.3-201ENST00000415453 231 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 AC017079.2-201ENST00000416102 485 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 BTF3L4P3-201ENST00000418879 476 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 MTND1P4-201ENST00000435196 415 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 PIGFP3-201ENST00000441918 722 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 MRPS17P3-201ENST00000465453 385 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 KC877373.1-201ENST00000479066 408 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 AC019235.1-201ENST00000503847 207 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 AC108078.2-201ENST00000510750 236 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 RNA5SP164-201ENST00000516533 110 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 RNU6-314P-201ENST00000516574 104 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 RANP9-201ENST00000519957 271 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 AC087369.1-201ENST00000520775 996 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 AP003034.1-201ENST00000534621 422 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 TRAV28-201ENST00000557548 323 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 AC245389.1-201ENST00000605141 529 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 AC006133.1-201ENST00000617106 264 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 CR392039.5-201ENST00000623201 510 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 AC027309.3-201ENST00000623419 351 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 AC139792.3-201ENST00000623525 224 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 MTND5P42-201ENST00000637720 498 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 AC027514.1-201ENST00000588561 1603 ntBASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.18□□□□□ -1.9
PCGF1Q9BSM1 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 RNU6-1167P-201ENST00000363227 94 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 RNU6-179P-201ENST00000363350 107 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 RNU6-288P-201ENST00000363690 104 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 RNU6-517P-201ENST00000384362 110 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 MIR200C-201ENST00000384980 68 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 MIR199A2-201ENST00000385289 110 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 MIR454-201ENST00000390180 115 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 RNU6-780P-201ENST00000391030 104 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 AL139247.1-201ENST00000422768 325 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms