Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.71□□□□□ -1.81
PAAF1Q9BRP4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 SNORA31-201ENST00000362607 130 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 RNY4P14-201ENST00000363656 96 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 RNU6-1090P-201ENST00000364065 94 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 Y_RNA.367-201ENST00000365544 101 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 RNU6-483P-201ENST00000384088 108 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 RNU6-74P-201ENST00000384235 107 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 MIR483-201ENST00000385070 76 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 MIR1277-201ENST00000408536 78 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 RNU2-71P-201ENST00000411395 189 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 RPS15AP9-201ENST00000439856 381 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 ANP32BP2-201ENST00000454525 545 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 SNRPGP5-201ENST00000456003 220 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 MTCO3P38-201ENST00000468910 766 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 RN7SL594P-201ENST00000470590 287 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 AC126389.1-201ENST00000477436 290 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 VWA8P1-201ENST00000510889 176 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 AL359273.1-201ENST00000510918 627 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 RNU6-1281P-201ENST00000516223 105 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 SNORA31.8-201ENST00000516327 108 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 RNU6-1178P-201ENST00000516674 107 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 RN7SKP57-201ENST00000517248 293 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 MTND1P35-201ENST00000526739 508 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 OR5D17P-201ENST00000531492 978 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 AC234778.2-201ENST00000566241 354 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 AC006504.3-201ENST00000586818 523 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 AP001330.5-201ENST00000607176 411 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 AC093788.1-201ENST00000609356 927 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 AC004696.1-201ENST00000614345 607 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 MIR7112-201ENST00000616126 65 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 U6.114-201ENST00000636407 96 ntBASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PAAF1Q9BRP4 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 AL133412.1-201ENST00000380194 2992 ntBASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 RNU6-50P-201ENST00000362356 103 ntBASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 Y_RNA.22-201ENST00000362492 102 ntBASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 RNU6-179P-201ENST00000363350 107 ntBASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 RNU6-960P-201ENST00000364056 120 ntBASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 AL591416.1-201ENST00000404015 867 ntBASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 SDCBPP3-201ENST00000419629 891 ntBASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 AL606489.2-201ENST00000433886 234 ntBASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 MTATP6P16-201ENST00000434543 526 ntBASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 DDX3P2-201ENST00000446138 111 ntBASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 AP006245.1-201ENST00000522549 120 ntBASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 AC104383.1-201ENST00000530297 370 ntBASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 AC034105.3-201ENST00000565294 442 ntBASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 BDH2P1-201ENST00000602288 736 ntBASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 AP000907.4-201ENST00000604143 237 ntBASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 MIR486-1-201ENST00000612171 68 ntBASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 AC004825.2-201ENST00000616634 455 ntBASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 AL356321.1-201ENST00000621360 228 ntBASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 NCAPGP1-201ENST00000505112 1814 ntBASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PAAF1Q9BRP4 USP8P1-201ENST00000494673 3183 ntBASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 RNA5SP197-201ENST00000363357 119 ntBASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 SNORA62.1-201ENST00000364287 154 ntBASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 Y_RNA.256-201ENST00000364594 104 ntBASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 RNU6-283P-201ENST00000364788 107 ntBASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 RNU4-48P-201ENST00000365559 182 ntBASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 SNORA36C-201ENST00000384289 132 ntBASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
PAAF1Q9BRP4 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms