Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
FOXC2Q99958 MTCO2P20-201ENST00000437339 673 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.29□□□□□ -2.04
FOXC2Q99958 Z82210.1-201ENST00000440037 231 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 COX6CP2-201ENST00000444980 225 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 DDX3P2-201ENST00000446138 111 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 RPS15AP27-201ENST00000449183 343 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 OR6K1P-201ENST00000456766 971 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 RPL23AP70-201ENST00000483361 460 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 FAM172BP-201ENST00000487497 1089 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 AC079395.1-201ENST00000510981 262 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 AC113155.1-201ENST00000511141 769 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.29□□□□□ -2.04
FOXC2Q99958 AC110760.3-202ENST00000515177 371 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 Y_RNA.673-201ENST00000516306 88 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 AC109329.2-201ENST00000519658 482 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.29□□□□□ -2.04
FOXC2Q99958 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
FOXC2Q99958 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.29□□□□□ -2.04
FOXC2Q99958 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.29□□□□□ -2.04
FOXC2Q99958 OR6C7P-201ENST00000547875 934 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 AC007954.1-201ENST00000554198 494 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 AC005498.1-201ENST00000592125 465 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 BBIP1P1-201ENST00000602999 279 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.29□□□□□ -2.04
FOXC2Q99958 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.29□□□□□ -2.04
FOXC2Q99958 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
FOXC2Q99958 AL161431.1-201ENST00000618966 4205 ntBASIC2.29□□□□□ -2.04
FOXC2Q99958 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
FOXC2Q99958 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.28□□□□□ -2.04
FOXC2Q99958 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
FOXC2Q99958 SNORA72.3-201ENST00000365074 132 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 SET-203ENST00000372688 801 ntTSL 2 BASIC2.28□□□□□ -2.04
FOXC2Q99958 RNU6-741P-201ENST00000383889 107 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 RNU6-217P-201ENST00000384164 104 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 MIR767-201ENST00000390228 109 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 BX682237.1-201ENST00000415016 335 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 SSR1P2-201ENST00000415208 787 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 AC092427.1-202ENST00000430569 476 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 AL591806.2-201ENST00000433122 173 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.28□□□□□ -2.04
FOXC2Q99958 MTND5P14-201ENST00000441481 1267 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 FGF7P5-201ENST00000441829 291 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 AC009296.1-201ENST00000443146 155 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.28□□□□□ -2.04
FOXC2Q99958 AC002381.1-201ENST00000447049 280 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 ATG12P2-201ENST00000456830 416 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 RN7SL633P-201ENST00000488974 297 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 AC138853.1-201ENST00000503549 823 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 RN7SKP40-201ENST00000517211 242 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.28□□□□□ -2.04
FOXC2Q99958 DEFB131D-201ENST00000526803 184 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 AP003497.1-201ENST00000528472 562 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.28□□□□□ -2.04
FOXC2Q99958 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 HPRT1P3-201ENST00000539521 576 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 GLYCAM1-201ENST00000546596 285 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
FOXC2Q99958 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.28□□□□□ -2.04
FOXC2Q99958 AL355836.1-201ENST00000555951 870 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
FOXC2Q99958 AC022662.1-201ENST00000580252 331 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 MIR4760-201ENST00000585040 80 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 DUXAP3-201ENST00000603616 594 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 AC105148.1-201ENST00000604961 409 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 AL450336.1-201ENST00000605180 586 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 AC008277.2-201ENST00000605196 797 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 AC025754.2-201ENST00000606491 432 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 AC079395.3-201ENST00000615161 484 ntBASIC2.28□□□□□ -2.04
FOXC2Q99958 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.28□□□□□ -2.04
FOXC2Q99958 AC099786.3-201ENST00000565735 1410 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
FOXC2Q99958 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.27□□□□□ -2.05
FOXC2Q99958 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
FOXC2Q99958 RNU6-97P-201ENST00000363387 104 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 SNORA68.1-201ENST00000364537 132 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
FOXC2Q99958 RNU6-636P-201ENST00000384598 107 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 U3.20-201ENST00000390909 217 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 RNU6-754P-201ENST00000391166 107 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 AL513475.1-201ENST00000406602 315 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 MTND1P21-201ENST00000412991 285 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 AC107081.1-201ENST00000414975 361 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.27□□□□□ -2.05
FOXC2Q99958 BX119904.4-201ENST00000424402 301 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.27□□□□□ -2.05
FOXC2Q99958 COX7BP2-201ENST00000437976 242 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 AL513043.1-201ENST00000439124 535 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
FOXC2Q99958 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.27□□□□□ -2.05
FOXC2Q99958 AL353705.4-201ENST00000449661 238 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC2.27□□□□□ -2.05
FOXC2Q99958 RPL21P134-201ENST00000453468 483 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.27□□□□□ -2.05
FOXC2Q99958 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.27□□□□□ -2.05
FOXC2Q99958 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.27□□□□□ -2.05
FOXC2Q99958 AC104090.1-201ENST00000506341 1171 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 AC092436.1-201ENST00000506450 503 ntBASIC2.27□□□□□ -2.05
FOXC2Q99958 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.27□□□□□ -2.05
FOXC2Q99958 RNY4P37-201ENST00000516225 96 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms