Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 MTND3P5-201ENST00000512798 333 ntBASIC3.76□□□□□ -1.81
SIN3AQ96ST3 AP002963.1-201ENST00000530590 184 ntBASIC3.76□□□□□ -1.81
SIN3AQ96ST3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.76□□□□□ -1.81
SIN3AQ96ST3 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.76□□□□□ -1.81
SIN3AQ96ST3 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.76□□□□□ -1.81
SIN3AQ96ST3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.76□□□□□ -1.81
SIN3AQ96ST3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.76□□□□□ -1.81
SIN3AQ96ST3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.76□□□□□ -1.81
SIN3AQ96ST3 MIR4672-201ENST00000583126 81 ntBASIC3.76□□□□□ -1.81
SIN3AQ96ST3 MIR3611-201ENST00000584484 83 ntBASIC3.76□□□□□ -1.81
SIN3AQ96ST3 TPMTP1-201ENST00000592307 737 ntBASIC3.76□□□□□ -1.81
SIN3AQ96ST3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.76□□□□□ -1.81
SIN3AQ96ST3 XIAPP1-201ENST00000603162 600 ntBASIC3.76□□□□□ -1.81
SIN3AQ96ST3 AC103591.3-201ENST00000608684 209 ntBASIC3.76□□□□□ -1.81
SIN3AQ96ST3 AC138749.5-201ENST00000611461 208 ntBASIC3.76□□□□□ -1.81
SIN3AQ96ST3 AC116165.2-201ENST00000616705 206 ntBASIC3.76□□□□□ -1.81
SIN3AQ96ST3 AC002550.2-201ENST00000621246 394 ntBASIC3.76□□□□□ -1.81
SIN3AQ96ST3 AL356585.4-201ENST00000623078 1229 ntBASIC3.76□□□□□ -1.81
SIN3AQ96ST3 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.76□□□□□ -1.81
SIN3AQ96ST3 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SIN3AQ96ST3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
SIN3AQ96ST3 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
SIN3AQ96ST3 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 AC092125.1-201ENST00000562568 1995 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 Y_RNA.46-201ENST00000362695 102 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 RNY4P24-201ENST00000362735 96 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 RNU6-623P-201ENST00000363143 105 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 RNU4-75P-201ENST00000364621 146 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 Y_RNA.359-201ENST00000365498 102 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 DEFB108C-201ENST00000400154 252 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 MIR1289-1-201ENST00000408836 144 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 CDK8P2-201ENST00000415020 547 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 AC093151.1-201ENST00000427711 313 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 RPS3P1-201ENST00000456781 192 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 AC006445.2-201ENST00000510061 472 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 MTCO2P32-201ENST00000514865 403 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 RNU6-1095P-201ENST00000516148 108 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 CR383656.7-201ENST00000548164 174 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 AC126177.3-201ENST00000551839 688 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 AC112191.3-201ENST00000604371 277 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 XIST_intron.1-201ENST00000619444 68 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 AC079597.1-201ENST00000624306 508 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 AC099654.13-201ENST00000639774 207 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SIN3AQ96ST3 AF127577.6-201ENST00000623352 2191 ntBASIC3.75□□□□□ -1.81
SIN3AQ96ST3 TEX21P-201ENST00000447107 1476 ntBASIC3.74□□□□□ -1.81
SIN3AQ96ST3 RNU6-297P-201ENST00000384636 107 ntBASIC3.74□□□□□ -1.81
SIN3AQ96ST3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SIN3AQ96ST3 SNORD115.1-201ENST00000391109 76 ntBASIC3.74□□□□□ -1.81
SIN3AQ96ST3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SIN3AQ96ST3 Y_RNA.608-201ENST00000410647 95 ntBASIC3.74□□□□□ -1.81
SIN3AQ96ST3 AL359704.1-201ENST00000411586 781 ntBASIC3.74□□□□□ -1.81
SIN3AQ96ST3 AC078974.1-201ENST00000411597 223 ntBASIC3.74□□□□□ -1.81
SIN3AQ96ST3 HMGN1P14-201ENST00000412459 517 ntBASIC3.74□□□□□ -1.81
SIN3AQ96ST3 TOMM22P1-201ENST00000418578 312 ntBASIC3.74□□□□□ -1.81
SIN3AQ96ST3 RPL21P32-201ENST00000419877 477 ntBASIC3.74□□□□□ -1.81
SIN3AQ96ST3 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.74□□□□□ -1.81
SIN3AQ96ST3 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.74□□□□□ -1.81
SIN3AQ96ST3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.74□□□□□ -1.81
SIN3AQ96ST3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.74□□□□□ -1.81
SIN3AQ96ST3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.74□□□□□ -1.81
SIN3AQ96ST3 SSXP1-201ENST00000453640 473 ntBASIC3.74□□□□□ -1.81
SIN3AQ96ST3 RPS20P32-201ENST00000456044 356 ntBASIC3.74□□□□□ -1.81
SIN3AQ96ST3 HMGB3P30-201ENST00000457863 606 ntBASIC3.74□□□□□ -1.81
SIN3AQ96ST3 AC126389.1-201ENST00000477436 290 ntBASIC3.74□□□□□ -1.81
SIN3AQ96ST3 AC092451.1-201ENST00000480211 153 ntBASIC3.74□□□□□ -1.81
SIN3AQ96ST3 ARL2BPP4-201ENST00000506854 471 ntBASIC3.74□□□□□ -1.81
SIN3AQ96ST3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.74□□□□□ -1.81
SIN3AQ96ST3 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.74□□□□□ -1.81
SIN3AQ96ST3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.74□□□□□ -1.81
SIN3AQ96ST3 AC022878.1-201ENST00000530684 149 ntBASIC3.74□□□□□ -1.81
SIN3AQ96ST3 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SIN3AQ96ST3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.74□□□□□ -1.81
SIN3AQ96ST3 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.74□□□□□ -1.81
SIN3AQ96ST3 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC3.74□□□□□ -1.81
SIN3AQ96ST3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.74□□□□□ -1.81
SIN3AQ96ST3 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.74□□□□□ -1.81
SIN3AQ96ST3 AC005771.1-201ENST00000585581 349 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms