Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AL445646.1-201ENST00000431784 216 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 MTND2P21-201ENST00000436242 1042 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 RPL23AP6-201ENST00000446637 472 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 MTCO1P48-201ENST00000448024 1096 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 RFC5P1-201ENST00000454419 874 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
AP1S3Q96PC3 RNU6-1256P-201ENST00000516539 103 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 RNA5SP137-201ENST00000516833 135 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.32□□□□□ -2.2
AP1S3Q96PC3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.32□□□□□ -2.2
AP1S3Q96PC3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.32□□□□□ -2.2
AP1S3Q96PC3 AC124947.2-202ENST00000552735 133 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 AC233702.2-202ENST00000562547 291 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 MIR4419B-201ENST00000577260 68 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 OR4K8P-201ENST00000578842 1048 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.32□□□□□ -2.2
AP1S3Q96PC3 AC068790.3-201ENST00000602988 553 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 KATNBL1P1-201ENST00000605192 748 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 AC007349.4-201ENST00000608114 532 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 AC003001.2-201ENST00000616294 831 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 AC012150.2-201ENST00000621300 544 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 AP002791.1-201ENST00000623291 381 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 PISRT1-201ENST00000626175 531 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC1.32□□□□□ -2.2
AP1S3Q96PC3 MTCO1P4-201ENST00000520516 1409 ntBASIC1.32□□□□□ -2.2
AP1S3Q96PC3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
AP1S3Q96PC3 ZNF355P-201ENST00000427301 3216 ntBASIC1.31□□□□□ -2.2
AP1S3Q96PC3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
AP1S3Q96PC3 RNU6-1005P-201ENST00000384519 107 ntBASIC1.31□□□□□ -2.2
AP1S3Q96PC3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
AP1S3Q96PC3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
AP1S3Q96PC3 U6atac.2-201ENST00000408644 118 ntBASIC1.31□□□□□ -2.2
AP1S3Q96PC3 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.31□□□□□ -2.2
AP1S3Q96PC3 OR4K6P-201ENST00000416478 897 ntBASIC1.31□□□□□ -2.2
AP1S3Q96PC3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.31□□□□□ -2.2
AP1S3Q96PC3 BEND7P1-201ENST00000422058 457 ntBASIC1.31□□□□□ -2.2
AP1S3Q96PC3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.31□□□□□ -2.2
AP1S3Q96PC3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.31□□□□□ -2.2
AP1S3Q96PC3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.31□□□□□ -2.2
AP1S3Q96PC3 Z82210.1-201ENST00000440037 231 ntBASIC1.31□□□□□ -2.2
AP1S3Q96PC3 DNAJC19P4-201ENST00000440115 345 ntBASIC1.31□□□□□ -2.2
AP1S3Q96PC3 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.31□□□□□ -2.2
AP1S3Q96PC3 AL353705.4-201ENST00000449661 238 ntBASIC1.31□□□□□ -2.2
AP1S3Q96PC3 MTCO3P2-201ENST00000457365 171 ntBASIC1.31□□□□□ -2.2
AP1S3Q96PC3 RNU1-98P-201ENST00000458992 160 ntBASIC1.31□□□□□ -2.2
AP1S3Q96PC3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
AP1S3Q96PC3 RPL9P6-201ENST00000492764 598 ntBASIC1.31□□□□□ -2.2
AP1S3Q96PC3 AC011352.3-201ENST00000505162 593 ntBASIC1.31□□□□□ -2.2
AP1S3Q96PC3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
AP1S3Q96PC3 RNU6-416P-201ENST00000516265 103 ntBASIC1.31□□□□□ -2.2
AP1S3Q96PC3 SNORA31.22-201ENST00000517204 135 ntBASIC1.31□□□□□ -2.2
AP1S3Q96PC3 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC1.31□□□□□ -2.2
AP1S3Q96PC3 AC105245.1-201ENST00000581934 244 ntBASIC1.31□□□□□ -2.2
AP1S3Q96PC3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.31□□□□□ -2.2
AP1S3Q96PC3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.31□□□□□ -2.2
AP1S3Q96PC3 SNRPGP19-201ENST00000603826 189 ntBASIC1.31□□□□□ -2.2
AP1S3Q96PC3 MTND4LP5-201ENST00000605152 292 ntBASIC1.31□□□□□ -2.2
AP1S3Q96PC3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.31□□□□□ -2.2
AP1S3Q96PC3 OR4G11P-202ENST00000642116 1414 ntBASIC1.31□□□□□ -2.2
AP1S3Q96PC3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
AP1S3Q96PC3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
AP1S3Q96PC3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
AP1S3Q96PC3 AC092881.1-201ENST00000638218 2733 ntBASIC1.3□□□□□ -2.2
AP1S3Q96PC3 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
AP1S3Q96PC3 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
AP1S3Q96PC3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
AP1S3Q96PC3 OR1L1-202ENST00000373686 1083 ntBASIC1.3□□□□□ -2.2
AP1S3Q96PC3 SNORA8-201ENST00000384574 139 ntBASIC1.3□□□□□ -2.2
AP1S3Q96PC3 MIR514A1-201ENST00000385133 98 ntBASIC1.3□□□□□ -2.2
AP1S3Q96PC3 RPL7P27-201ENST00000403775 720 ntBASIC1.3□□□□□ -2.2
AP1S3Q96PC3 SNORA11.1-201ENST00000408133 129 ntBASIC1.3□□□□□ -2.2
AP1S3Q96PC3 RNA5SP425-201ENST00000410336 112 ntBASIC1.3□□□□□ -2.2
AP1S3Q96PC3 RNU2-15P-201ENST00000410692 191 ntBASIC1.3□□□□□ -2.2
AP1S3Q96PC3 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.3□□□□□ -2.2
AP1S3Q96PC3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.3□□□□□ -2.2
AP1S3Q96PC3 UBE2D3P1-201ENST00000436669 444 ntBASIC1.3□□□□□ -2.2
AP1S3Q96PC3 USP9YP15-201ENST00000442391 422 ntBASIC1.3□□□□□ -2.2
AP1S3Q96PC3 RAD1P2-201ENST00000446414 663 ntBASIC1.3□□□□□ -2.2
AP1S3Q96PC3 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.3□□□□□ -2.2
AP1S3Q96PC3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.3□□□□□ -2.2
AP1S3Q96PC3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.3□□□□□ -2.2
AP1S3Q96PC3 AC079203.1-201ENST00000487972 404 ntBASIC1.3□□□□□ -2.2
AP1S3Q96PC3 RPL23AP63-201ENST00000498752 471 ntBASIC1.3□□□□□ -2.2
AP1S3Q96PC3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
AP1S3Q96PC3 AC104685.1-201ENST00000502445 371 ntBASIC1.3□□□□□ -2.2
AP1S3Q96PC3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
AP1S3Q96PC3 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.3□□□□□ -2.2
AP1S3Q96PC3 AC107393.1-201ENST00000512403 346 ntBASIC1.3□□□□□ -2.2
AP1S3Q96PC3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.3□□□□□ -2.2
AP1S3Q96PC3 CR383656.7-201ENST00000548164 174 ntBASIC1.3□□□□□ -2.2
AP1S3Q96PC3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC1.3□□□□□ -2.2
AP1S3Q96PC3 AC022254.1-201ENST00000567857 235 ntBASIC1.3□□□□□ -2.2
AP1S3Q96PC3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.3□□□□□ -2.2
AP1S3Q96PC3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.3□□□□□ -2.2
AP1S3Q96PC3 AL161729.4-201ENST00000604650 476 ntBASIC1.3□□□□□ -2.2
AP1S3Q96PC3 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.3□□□□□ -2.2
AP1S3Q96PC3 AC024581.2-201ENST00000619986 252 ntBASIC1.3□□□□□ -2.2
AP1S3Q96PC3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
AP1S3Q96PC3 AP000648.3-201ENST00000623539 4507 ntBASIC1.29□□□□□ -2.2
AP1S3Q96PC3 WWP1P1-201ENST00000466609 2769 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms