Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 RNA5SP267-201ENST00000364893 126 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 U3.19-201ENST00000390893 196 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 MTCYBP36-201ENST00000404146 440 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 RN7SKP142-201ENST00000411236 328 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 RPL17P12-201ENST00000413391 526 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 USP12PX-201ENST00000432383 1057 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 ST13P20-201ENST00000447996 1065 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 SNRPGP9-201ENST00000456025 225 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 RNA5SP269-201ENST00000459032 137 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 RN7SL75P-201ENST00000461926 281 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 AC009901.1-201ENST00000506703 541 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 MTCO3P7-201ENST00000510008 774 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 RNU6-390P-201ENST00000516259 103 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 NRON-201ENST00000517270 370 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 AP004247.1-201ENST00000531556 1289 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 AC068276.1-201ENST00000605793 379 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 AC087752.4-201ENST00000605911 462 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 AC103591.3-201ENST00000608684 209 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 AC103710.1-201ENST00000610003 901 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 AC025048.6-202ENST00000627667 438 ntBASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.05□□□□□ -1.92
PDLIM5Q96HC4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 API5P2-201ENST00000397055 1498 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 RNU1-39P-201ENST00000383897 165 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 SNORD21-201ENST00000383953 95 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 RPL7P25-201ENST00000404151 721 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 RNU2-33P-201ENST00000410344 192 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 RNU6-193P-201ENST00000410977 107 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AL451054.2-201ENST00000420896 202 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 RPS27AP14-201ENST00000422868 454 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 MTND1P28-201ENST00000435623 950 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 RPL37P21-201ENST00000435890 276 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 RSU1P2-202ENST00000437884 485 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 RPS24P1-201ENST00000438550 371 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 BNIP3P2-201ENST00000441221 577 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AL831737.1-201ENST00000441288 271 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 MTCO3P45-201ENST00000443036 613 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 USP9YP29-201ENST00000445112 563 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 GDI2P2-201ENST00000445131 608 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 DDX3P2-201ENST00000446138 111 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 VN1R34P-201ENST00000447387 883 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 GAPDHP27-201ENST00000447427 1020 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 TPT1P14-201ENST00000448018 505 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 RN7SL863P-201ENST00000462370 296 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 KC877373.1-201ENST00000479066 408 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AC138853.1-201ENST00000503549 823 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AC079140.3-201ENST00000511111 550 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 RN7SKP43-201ENST00000516173 320 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AC068135.2-201ENST00000569293 1028 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AC005951.2-201ENST00000576282 495 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 MIR4307-201ENST00000582802 84 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AC005498.1-201ENST00000592125 465 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AC020895.1-201ENST00000595362 272 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AC008739.2-201ENST00000597006 317 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AC112187.2-201ENST00000604345 283 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AL035413.2-201ENST00000604801 525 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 HULC.1-201ENST00000612720 240 ntBASIC3.04□□□□□ -1.92
PDLIM5Q96HC4 AC027807.2-201ENST00000616099 408 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms