Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.17□□□□□ -1.58
IFT43Q96FT9 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.17□□□□□ -1.58
IFT43Q96FT9 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
IFT43Q96FT9 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
IFT43Q96FT9 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
IFT43Q96FT9 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
IFT43Q96FT9 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.17□□□□□ -1.58
IFT43Q96FT9 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
IFT43Q96FT9 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
IFT43Q96FT9 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
IFT43Q96FT9 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
IFT43Q96FT9 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
IFT43Q96FT9 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
IFT43Q96FT9 OR51H2P-202ENST00000641424 3046 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 AC009812.4-201ENST00000569134 1805 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
IFT43Q96FT9 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
IFT43Q96FT9 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
IFT43Q96FT9 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
IFT43Q96FT9 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
IFT43Q96FT9 INTS6P1-201ENST00000504674 2530 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
IFT43Q96FT9 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
IFT43Q96FT9 RNU6-212P-201ENST00000362642 104 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 MIR301A-201ENST00000385261 86 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 AL513331.1-201ENST00000411908 397 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 AC007738.1-201ENST00000413892 348 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 AC093414.1-201ENST00000434712 514 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.16□□□□□ -1.58
IFT43Q96FT9 HSPD1P21-201ENST00000436541 245 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 USP9YP7-201ENST00000436723 430 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.16□□□□□ -1.58
IFT43Q96FT9 USP9YP32-201ENST00000452432 430 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 AC092647.2-201ENST00000452998 253 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 AL445433.1-201ENST00000457507 257 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 RNU6-1037P-201ENST00000459571 107 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 HMGN2P13-201ENST00000476476 274 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 AC022493.1-201ENST00000492984 337 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC5.16□□□□□ -1.58
IFT43Q96FT9 RNU1-86P-201ENST00000516108 154 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 MIR892C-201ENST00000516410 77 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 RNU6-911P-201ENST00000516523 104 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 RNU1-107P-201ENST00000516617 154 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 RN7SKP92-201ENST00000517266 244 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 NDUFB4P11-201ENST00000560510 395 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 AC012433.1-201ENST00000588916 398 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 AC011487.3-201ENST00000593607 453 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 AL121917.1-203ENST00000605534 577 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 AC093799.2-201ENST00000610062 578 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 MIR1244-1-201ENST00000612829 85 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
IFT43Q96FT9 MIR1244-3-201ENST00000635744 85 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 MIR1244-2-201ENST00000636449 85 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 MIR1244-4-202ENST00000636813 85 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 AL450326.2-201ENST00000421913 1962 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.16□□□□□ -1.58
IFT43Q96FT9 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.15□□□□□ -1.58
IFT43Q96FT9 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC5.15□□□□□ -1.58
IFT43Q96FT9 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.15□□□□□ -1.58
IFT43Q96FT9 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
IFT43Q96FT9 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
IFT43Q96FT9 U8.8-201ENST00000365399 135 ntBASIC5.15□□□□□ -1.59
IFT43Q96FT9 Y_RNA.416-201ENST00000384014 113 ntBASIC5.15□□□□□ -1.59
IFT43Q96FT9 RNU6-356P-201ENST00000384140 107 ntBASIC5.15□□□□□ -1.59
IFT43Q96FT9 RN7SKP114-201ENST00000410327 279 ntBASIC5.15□□□□□ -1.59
IFT43Q96FT9 RAC1P3-201ENST00000416129 580 ntBASIC5.15□□□□□ -1.59
IFT43Q96FT9 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.15□□□□□ -1.59
IFT43Q96FT9 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.15□□□□□ -1.59
IFT43Q96FT9 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.15□□□□□ -1.59
IFT43Q96FT9 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.15□□□□□ -1.59
IFT43Q96FT9 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.15□□□□□ -1.59
IFT43Q96FT9 RNU6-1315P-201ENST00000517187 99 ntBASIC5.15□□□□□ -1.59
IFT43Q96FT9 AC107918.3-201ENST00000533272 382 ntBASIC5.15□□□□□ -1.59
IFT43Q96FT9 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.15□□□□□ -1.59
IFT43Q96FT9 TRAV37-201ENST00000553906 342 ntBASIC5.15□□□□□ -1.59
IFT43Q96FT9 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.15□□□□□ -1.59
IFT43Q96FT9 AC004584.2-201ENST00000570407 410 ntBASIC5.15□□□□□ -1.59
IFT43Q96FT9 MIR3934-201ENST00000579806 107 ntBASIC5.15□□□□□ -1.59
IFT43Q96FT9 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.15□□□□□ -1.59
IFT43Q96FT9 AC123912.5-201ENST00000605470 343 ntBASIC5.15□□□□□ -1.59
IFT43Q96FT9 AC107294.1-201ENST00000609524 467 ntBASIC5.15□□□□□ -1.59
IFT43Q96FT9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.15□□□□□ -1.59
IFT43Q96FT9 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.15□□□□□ -1.59
IFT43Q96FT9 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.15□□□□□ -1.59
IFT43Q96FT9 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
IFT43Q96FT9 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.15□□□□□ -1.59
IFT43Q96FT9 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.15□□□□□ -1.59
IFT43Q96FT9 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
IFT43Q96FT9 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC5.14□□□□□ -1.59
IFT43Q96FT9 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
IFT43Q96FT9 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
IFT43Q96FT9 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
IFT43Q96FT9 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
IFT43Q96FT9 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
IFT43Q96FT9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
IFT43Q96FT9 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
IFT43Q96FT9 RN7SKP103-201ENST00000363848 320 ntBASIC5.14□□□□□ -1.59
IFT43Q96FT9 Y_RNA.180-201ENST00000363867 113 ntBASIC5.14□□□□□ -1.59
IFT43Q96FT9 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.14□□□□□ -1.59
IFT43Q96FT9 RNU6-611P-201ENST00000384276 104 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms