Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 Y_RNA.159-201ENST00000363674 87 ntBASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 RNU6-960P-201ENST00000364056 120 ntBASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 RNU6-188P-201ENST00000364207 107 ntBASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 MIR1-2-201ENST00000384961 85 ntBASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 CALM2P3-201ENST00000400429 449 ntBASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 AL590002.1-201ENST00000406554 418 ntBASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 RNU2-9P-201ENST00000410194 145 ntBASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 RPL23AP20-201ENST00000447965 421 ntBASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 AC009646.1-201ENST00000510455 318 ntBASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 SNORA70.16-201ENST00000516390 95 ntBASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 AC002545.1-201ENST00000592511 181 ntBASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 AL121992.2-201ENST00000606262 256 ntBASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 AC073073.2-201ENST00000609827 2578 ntBASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 PRO1804-201ENST00000623780 2050 ntBASIC4.33□□□□□ -1.72
CHMP4CQ96CF2 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 Y_RNA.22-201ENST00000362492 102 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 Y_RNA.367-201ENST00000365544 101 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 Y_RNA.372-201ENST00000365599 102 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 Y_RNA.409-201ENST00000383990 98 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 AL590383.1-201ENST00000428602 75 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 RPL36AP6-201ENST00000435770 321 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 Z99127.3-201ENST00000448158 395 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 AC126389.1-201ENST00000477436 290 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 RNU2-27P-201ENST00000516185 142 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 SCARNA15.2-201ENST00000516409 127 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 MTND4LP26-201ENST00000518144 282 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 AC026403.1-201ENST00000518938 295 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 AP005205.1-201ENST00000563503 508 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 MTATP6P3-201ENST00000581686 676 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 DPPA3P3-201ENST00000603842 430 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 AC025449.1-201ENST00000603896 529 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 AC012468.1-201ENST00000604888 430 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 RNU1-30P-201ENST00000606575 163 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 AC092954.2-201ENST00000609103 430 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 AC012314.7-201ENST00000619693 93 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 AL160394.1-201ENST00000624765 724 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 AL137003.2-201ENST00000606924 2538 ntBASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CHMP4CQ96CF2 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 AC008568.2-201ENST00000623862 2313 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 RNU4-12P-201ENST00000365233 139 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 RNU6-74P-201ENST00000384235 107 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 Y_RNA.481-201ENST00000384373 102 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 MIR548F1-201ENST00000408667 84 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 AL513331.1-201ENST00000411908 397 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 RPL30P2-201ENST00000414021 291 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 AL451054.2-201ENST00000420896 202 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 AC093106.2-201ENST00000428212 385 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 HMGB1P27-201ENST00000431429 603 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 NDUFB1P1-201ENST00000435191 180 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 HMGB3P12-201ENST00000438745 556 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 NEFMP1-201ENST00000443423 1006 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 AC027673.1-201ENST00000456245 405 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 AC013267.1-201ENST00000458227 267 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 RPL31P60-201ENST00000478450 367 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 HSPD1P15-201ENST00000505573 1122 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 AC116562.3-201ENST00000506136 177 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 RN7SKP258-201ENST00000517151 304 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 NRON-201ENST00000517270 370 ntBASIC4.31□□□□□ -1.72
CHMP4CQ96CF2 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms