Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.89□□□□□ -1.95
RFT1Q96AA3 ATP5F1P5-201ENST00000526403 760 ntBASIC2.89□□□□□ -1.95
RFT1Q96AA3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.89□□□□□ -1.95
RFT1Q96AA3 AC091564.4-201ENST00000533934 2194 ntBASIC2.89□□□□□ -1.95
RFT1Q96AA3 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
RFT1Q96AA3 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.89□□□□□ -1.95
RFT1Q96AA3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.89□□□□□ -1.95
RFT1Q96AA3 AC006362.1-201ENST00000567392 174 ntBASIC2.89□□□□□ -1.95
RFT1Q96AA3 GLUD1P4-201ENST00000590914 418 ntBASIC2.89□□□□□ -1.95
RFT1Q96AA3 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.89□□□□□ -1.95
RFT1Q96AA3 AC078795.2-201ENST00000602835 1252 ntBASIC2.89□□□□□ -1.95
RFT1Q96AA3 U73023.1-201ENST00000603134 700 ntBASIC2.89□□□□□ -1.95
RFT1Q96AA3 AC005332.10-201ENST00000612725 619 ntBASIC2.89□□□□□ -1.95
RFT1Q96AA3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.89□□□□□ -1.95
RFT1Q96AA3 AC009509.4-201ENST00000619202 509 ntBASIC2.89□□□□□ -1.95
RFT1Q96AA3 AC099842.1-201ENST00000619919 596 ntBASIC2.89□□□□□ -1.95
RFT1Q96AA3 SNORD39.4-201ENST00000620099 78 ntBASIC2.89□□□□□ -1.95
RFT1Q96AA3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.89□□□□□ -1.95
RFT1Q96AA3 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.89□□□□□ -1.95
RFT1Q96AA3 AC092656.1-203ENST00000624134 423 ntBASIC2.89□□□□□ -1.95
RFT1Q96AA3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
RFT1Q96AA3 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
RFT1Q96AA3 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RFT1Q96AA3 FAM35BP-202ENST00000497389 3337 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RFT1Q96AA3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RFT1Q96AA3 RNU4-35P-201ENST00000362588 141 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 RNU6-799P-201ENST00000363567 107 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 RNU6-1027P-201ENST00000383998 107 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 SNORA5A-201ENST00000384111 134 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 RNU6-278P-201ENST00000390945 109 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 RNU6-192P-201ENST00000391253 100 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RFT1Q96AA3 Y_RNA.608-201ENST00000410647 95 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.88□□□□□ -1.95
RFT1Q96AA3 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.88□□□□□ -1.95
RFT1Q96AA3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.88□□□□□ -1.95
RFT1Q96AA3 SAR1AP4-201ENST00000429225 591 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 ATP5JP1-201ENST00000431631 322 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.88□□□□□ -1.95
RFT1Q96AA3 RPL22P17-201ENST00000438729 315 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 PIGFP3-201ENST00000441918 722 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 MTATP6P30-201ENST00000443540 664 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.88□□□□□ -1.95
RFT1Q96AA3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
RFT1Q96AA3 AC013267.1-201ENST00000458227 267 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 AC034236.1-201ENST00000469891 373 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 AC091965.2-201ENST00000512324 613 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.88□□□□□ -1.95
RFT1Q96AA3 RNU1-95P-201ENST00000516357 160 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 RNU1-128P-201ENST00000516704 160 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RFT1Q96AA3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.88□□□□□ -1.95
RFT1Q96AA3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC2.88□□□□□ -1.95
RFT1Q96AA3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.88□□□□□ -1.95
RFT1Q96AA3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.88□□□□□ -1.95
RFT1Q96AA3 AC005476.1-201ENST00000554427 397 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.88□□□□□ -1.95
RFT1Q96AA3 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.88□□□□□ -1.95
RFT1Q96AA3 AC002545.1-201ENST00000592511 181 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 AL161729.4-201ENST00000604650 476 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.88□□□□□ -1.95
RFT1Q96AA3 AL031775.1-201ENST00000607014 887 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 AC239868.4-201ENST00000608318 671 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 AL136313.1-201ENST00000624804 202 ntBASIC2.88□□□□□ -1.95
RFT1Q96AA3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.88□□□□□ -1.95
RFT1Q96AA3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.88□□□□□ -1.95
RFT1Q96AA3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RFT1Q96AA3 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
RFT1Q96AA3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.87□□□□□ -1.95
RFT1Q96AA3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.87□□□□□ -1.95
RFT1Q96AA3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.87□□□□□ -1.95
RFT1Q96AA3 RNU5E-5P-201ENST00000365379 116 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 Y_RNA.359-201ENST00000365498 102 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 RNU6-217P-201ENST00000384164 104 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 SNORD17-201ENST00000390930 237 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
RFT1Q96AA3 DEFB108C-201ENST00000400154 252 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 MTCYBP36-201ENST00000404146 440 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 RN7SKP142-201ENST00000411236 328 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 ATG3P1-201ENST00000419507 911 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.87□□□□□ -1.95
RFT1Q96AA3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.87□□□□□ -1.95
RFT1Q96AA3 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.87□□□□□ -1.95
RFT1Q96AA3 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.87□□□□□ -1.95
RFT1Q96AA3 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.87□□□□□ -1.95
RFT1Q96AA3 AC092641.1-201ENST00000440229 772 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 AL590365.1-201ENST00000450788 243 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.87□□□□□ -1.95
RFT1Q96AA3 SNRPGP6-201ENST00000451124 220 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 MTND1P12-201ENST00000455231 147 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 AC068587.1-201ENST00000483613 781 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 AF213884.2-201ENST00000510417 903 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC2.87□□□□□ -1.95
RFT1Q96AA3 RNU6-390P-201ENST00000516259 103 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 RNU6-928P-201ENST00000516876 104 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 RN7SKP258-201ENST00000517151 304 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 RNU1-45P-201ENST00000517191 141 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 RNA5SP291-201ENST00000517222 105 ntBASIC2.87□□□□□ -1.95
RFT1Q96AA3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms