Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MIR7851-201ENST00000610611 160 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 AC090132.2-201ENST00000615881 347 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 AC093648.1-201ENST00000623546 606 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 AL160394.1-201ENST00000624765 724 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 IPO8P1-201ENST00000455509 3109 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 ZNF680P1-201ENST00000436625 1469 ntBASIC3.66□□□□□ -1.82
HMGB4Q8WW32 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HMGB4Q8WW32 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HMGB4Q8WW32 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.65□□□□□ -1.82
HMGB4Q8WW32 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HMGB4Q8WW32 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HMGB4Q8WW32 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.65□□□□□ -1.82
HMGB4Q8WW32 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.65□□□□□ -1.83
HMGB4Q8WW32 RNU6-1085P-201ENST00000363576 107 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 RNU6-14P-201ENST00000384630 106 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 AC068050.1-201ENST00000394891 380 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 AL590002.1-201ENST00000406554 418 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 RNU2-9P-201ENST00000410194 145 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 MTATP6P13-201ENST00000438531 667 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGB4Q8WW32 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGB4Q8WW32 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.65□□□□□ -1.83
HMGB4Q8WW32 AC008155.2-201ENST00000464337 397 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 RPL31P60-201ENST00000478450 367 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 AC025518.1-201ENST00000479856 347 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.65□□□□□ -1.83
HMGB4Q8WW32 AC116562.3-201ENST00000506136 177 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 AC026784.1-201ENST00000507986 352 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 AF213884.2-201ENST00000510417 903 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 ARL2BPP6-201ENST00000512757 439 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGB4Q8WW32 Y_RNA.693-201ENST00000516641 110 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 AC068587.5-201ENST00000528506 175 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 AK6P1-201ENST00000540219 478 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGB4Q8WW32 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGB4Q8WW32 AP005205.1-201ENST00000563503 508 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 AC024619.4-201ENST00000580924 316 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 AC005000.2-201ENST00000605468 310 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 AC007619.2-201ENST00000605743 379 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.65□□□□□ -1.83
HMGB4Q8WW32 AL589994.2-201ENST00000621124 579 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.65□□□□□ -1.83
HMGB4Q8WW32 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
HMGB4Q8WW32 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HMGB4Q8WW32 ELF2P3-201ENST00000445099 1506 ntBASIC3.65□□□□□ -1.83
HMGB4Q8WW32 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
HMGB4Q8WW32 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
HMGB4Q8WW32 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 RNU6-946P-201ENST00000383878 107 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 RNU6-606P-201ENST00000384721 111 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 MIR454-201ENST00000390180 115 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 NDUFB4P4-201ENST00000404822 243 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 CIR1P3-201ENST00000405137 479 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 U3.42-201ENST00000408746 214 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 AC114491.1-201ENST00000416095 246 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 YPEL5P1-201ENST00000419731 367 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 AC087650.1-201ENST00000431445 468 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 NEFMP1-201ENST00000443423 1006 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 AL121877.1-201ENST00000453704 622 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 AC027673.1-201ENST00000456245 405 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 AP001086.1-201ENST00000494882 321 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 HMGB3P15-201ENST00000507326 574 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 AL117351.2-201ENST00000513571 157 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 RNU6-927P-201ENST00000516199 100 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 RN7SKP57-201ENST00000517248 293 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 AC104383.1-201ENST00000530297 370 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 AC004024.1-201ENST00000549244 247 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 AC007363.1-201ENST00000604736 620 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 AL110115.1-201ENST00000614396 364 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 AC007998.5-201ENST00000622938 237 ntBASIC3.64□□□□□ -1.83
HMGB4Q8WW32 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HMGB4Q8WW32 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms