Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM41Q8WV44 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM41Q8WV44 RNA5SP119-201ENST00000362715 117 ntBASIC8.02□□□□□ -1.13
TRIM41Q8WV44 Y_RNA.539-201ENST00000384635 107 ntBASIC8.02□□□□□ -1.13
TRIM41Q8WV44 RNA5SP397-201ENST00000391323 118 ntBASIC8.02□□□□□ -1.13
TRIM41Q8WV44 RPL21P38-201ENST00000418090 167 ntBASIC8.02□□□□□ -1.13
TRIM41Q8WV44 IGLVIV-53-201ENST00000520107 367 ntBASIC8.02□□□□□ -1.13
TRIM41Q8WV44 CBX3P8-201ENST00000532412 525 ntBASIC8.02□□□□□ -1.13
TRIM41Q8WV44 AC107294.1-201ENST00000609524 467 ntBASIC8.02□□□□□ -1.13
TRIM41Q8WV44 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC8.02□□□□□ -1.13
TRIM41Q8WV44 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
TRIM41Q8WV44 AL049555.1-201ENST00000562834 1933 ntBASIC8.01□□□□□ -1.13
TRIM41Q8WV44 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
TRIM41Q8WV44 AC027287.1-201ENST00000553115 1453 ntBASIC8.01□□□□□ -1.13
TRIM41Q8WV44 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM41Q8WV44 RNU6-662P-201ENST00000384253 104 ntBASIC8.01□□□□□ -1.13
TRIM41Q8WV44 MIR625-201ENST00000385047 85 ntBASIC8.01□□□□□ -1.13
TRIM41Q8WV44 RNU2-14P-201ENST00000411053 191 ntBASIC8.01□□□□□ -1.13
TRIM41Q8WV44 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC8.01□□□□□ -1.13
TRIM41Q8WV44 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC8.01□□□□□ -1.13
TRIM41Q8WV44 NEFMP1-201ENST00000443423 1006 ntBASIC8.01□□□□□ -1.13
TRIM41Q8WV44 FCF1P4-201ENST00000448326 183 ntBASIC8.01□□□□□ -1.13
TRIM41Q8WV44 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC8.01□□□□□ -1.13
TRIM41Q8WV44 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC8.01□□□□□ -1.13
TRIM41Q8WV44 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC8.01□□□□□ -1.13
TRIM41Q8WV44 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC8.01□□□□□ -1.13
TRIM41Q8WV44 FKBP1BP1-201ENST00000553366 325 ntBASIC8.01□□□□□ -1.13
TRIM41Q8WV44 AC012119.1-201ENST00000603184 222 ntBASIC8.01□□□□□ -1.13
TRIM41Q8WV44 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM41Q8WV44 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC8.01□□□□□ -1.13
TRIM41Q8WV44 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
TRIM41Q8WV44 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
TRIM41Q8WV44 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC8□□□□□ -1.13
TRIM41Q8WV44 AC133552.1-201ENST00000569988 4007 ntBASIC8□□□□□ -1.13
TRIM41Q8WV44 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
TRIM41Q8WV44 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC8□□□□□ -1.13
TRIM41Q8WV44 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC8□□□□□ -1.13
TRIM41Q8WV44 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
TRIM41Q8WV44 RNY1P16-201ENST00000363063 111 ntBASIC8□□□□□ -1.13
TRIM41Q8WV44 MIR628-201ENST00000385229 95 ntBASIC8□□□□□ -1.13
TRIM41Q8WV44 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC8□□□□□ -1.13
TRIM41Q8WV44 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC8□□□□□ -1.13
TRIM41Q8WV44 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC8□□□□□ -1.13
TRIM41Q8WV44 AL133396.1-201ENST00000432048 687 ntBASIC8□□□□□ -1.13
TRIM41Q8WV44 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC8□□□□□ -1.13
TRIM41Q8WV44 AL133547.1-201ENST00000448546 220 ntBASIC8□□□□□ -1.13
TRIM41Q8WV44 RNU7-138P-201ENST00000459479 64 ntBASIC8□□□□□ -1.13
TRIM41Q8WV44 VN1R105P-201ENST00000486595 910 ntBASIC8□□□□□ -1.13
TRIM41Q8WV44 RPL30P11-201ENST00000495304 339 ntBASIC8□□□□□ -1.13
TRIM41Q8WV44 AP003730.1-201ENST00000524605 285 ntBASIC8□□□□□ -1.13
TRIM41Q8WV44 NF1P5-201ENST00000588287 448 ntBASIC8□□□□□ -1.13
TRIM41Q8WV44 AC091979.2-201ENST00000607514 214 ntBASIC8□□□□□ -1.13
TRIM41Q8WV44 MIR1244-1-201ENST00000612829 85 ntBASIC8□□□□□ -1.13
TRIM41Q8WV44 MIR1244-3-201ENST00000635744 85 ntBASIC8□□□□□ -1.13
TRIM41Q8WV44 MIR1244-2-201ENST00000636449 85 ntBASIC8□□□□□ -1.13
TRIM41Q8WV44 MIR1244-4-202ENST00000636813 85 ntBASIC8□□□□□ -1.13
TRIM41Q8WV44 AC132825.6-201ENST00000638861 357 ntBASIC8□□□□□ -1.13
TRIM41Q8WV44 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC8□□□□□ -1.13
TRIM41Q8WV44 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
TRIM41Q8WV44 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
TRIM41Q8WV44 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC8□□□□□ -1.13
TRIM41Q8WV44 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC8□□□□□ -1.13
TRIM41Q8WV44 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
TRIM41Q8WV44 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC7.99□□□□□ -1.13
TRIM41Q8WV44 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
TRIM41Q8WV44 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
TRIM41Q8WV44 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
TRIM41Q8WV44 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
TRIM41Q8WV44 RNU6-1303P-201ENST00000364841 107 ntBASIC7.99□□□□□ -1.13
TRIM41Q8WV44 Y_RNA.518-201ENST00000384552 113 ntBASIC7.99□□□□□ -1.13
TRIM41Q8WV44 U3.29-201ENST00000391296 212 ntBASIC7.99□□□□□ -1.13
TRIM41Q8WV44 AP000275.1-201ENST00000411943 390 ntBASIC7.99□□□□□ -1.13
TRIM41Q8WV44 AC092809.3-201ENST00000415453 231 ntBASIC7.99□□□□□ -1.13
TRIM41Q8WV44 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC7.99□□□□□ -1.13
TRIM41Q8WV44 AL117339.2-201ENST00000430475 180 ntBASIC7.99□□□□□ -1.13
TRIM41Q8WV44 AL445584.1-201ENST00000431451 330 ntBASIC7.99□□□□□ -1.13
TRIM41Q8WV44 AC004383.1-201ENST00000438135 289 ntBASIC7.99□□□□□ -1.13
TRIM41Q8WV44 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC7.99□□□□□ -1.13
TRIM41Q8WV44 AC234775.1-201ENST00000454247 670 ntBASIC7.99□□□□□ -1.13
TRIM41Q8WV44 AC110792.1-201ENST00000491826 472 ntBASIC7.99□□□□□ -1.13
TRIM41Q8WV44 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC7.99□□□□□ -1.13
TRIM41Q8WV44 RNU6-390P-201ENST00000516259 103 ntBASIC7.99□□□□□ -1.13
TRIM41Q8WV44 AC022868.1-201ENST00000517767 391 ntBASIC7.99□□□□□ -1.13
TRIM41Q8WV44 AC144568.1-201ENST00000520139 137 ntBASIC7.99□□□□□ -1.13
TRIM41Q8WV44 AC100870.1-201ENST00000522035 505 ntBASIC7.99□□□□□ -1.13
TRIM41Q8WV44 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC7.99□□□□□ -1.13
TRIM41Q8WV44 RN7SL652P-201ENST00000577769 300 ntBASIC7.99□□□□□ -1.13
TRIM41Q8WV44 MIR4286-201ENST00000580651 93 ntBASIC7.99□□□□□ -1.13
TRIM41Q8WV44 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
TRIM41Q8WV44 AC006557.5-201ENST00000603126 811 ntBASIC7.99□□□□□ -1.13
TRIM41Q8WV44 AC007998.5-201ENST00000622938 237 ntBASIC7.99□□□□□ -1.13
TRIM41Q8WV44 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC7.99□□□□□ -1.13
TRIM41Q8WV44 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
TRIM41Q8WV44 USP45-204ENST00000369233 2514 ntTSL 5 BASIC7.98□□□□□ -1.13
TRIM41Q8WV44 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
TRIM41Q8WV44 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC7.98□□□□□ -1.13
TRIM41Q8WV44 RNU6-754P-201ENST00000391166 107 ntBASIC7.98□□□□□ -1.13
TRIM41Q8WV44 RPL23AP26-201ENST00000412728 464 ntBASIC7.98□□□□□ -1.13
TRIM41Q8WV44 AL591704.1-201ENST00000432574 275 ntBASIC7.98□□□□□ -1.13
TRIM41Q8WV44 RPS29P7-201ENST00000439662 171 ntBASIC7.98□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms