Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.41□□□□□ -1.54
NEDD1Q8NHV4 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 RAD17P1-201ENST00000418130 2042 ntBASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 AC126755.2-208ENST00000327792 462 ntBASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 AC138969.1-213ENST00000331436 462 ntBASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 RNU1-76P-201ENST00000362903 159 ntBASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 RNU6-434P-201ENST00000384376 107 ntBASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 SDHCP2-201ENST00000398565 501 ntBASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 AL024474.1-201ENST00000404655 591 ntBASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 U3.42-201ENST00000408746 214 ntBASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 AC017079.2-201ENST00000416102 485 ntBASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 AC087650.1-201ENST00000431445 468 ntBASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 HMGB3P16-201ENST00000508037 287 ntBASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 AC074133.1-201ENST00000515696 183 ntBASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 RANP3-201ENST00000530970 276 ntBASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 LSM6P2-201ENST00000552208 177 ntBASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 AC123768.4-201ENST00000616244 701 ntBASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 MIR4679-1-201ENST00000637619 75 ntBASIC5.4□□□□□ -1.54
NEDD1Q8NHV4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
NEDD1Q8NHV4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.4□□□□□ -1.55
NEDD1Q8NHV4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
NEDD1Q8NHV4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
NEDD1Q8NHV4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
NEDD1Q8NHV4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 AC139713.2-214ENST00000642059 1811 ntBASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 AL109809.4-201ENST00000603520 2185 ntBASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 RNU6-1303P-201ENST00000364841 107 ntBASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 PRRC2CP1-201ENST00000404428 159 ntBASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 AL080315.1-201ENST00000406055 466 ntBASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 UBE2V1P4-201ENST00000425374 344 ntBASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 AL732292.1-201ENST00000426692 226 ntBASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 CALM2P2-201ENST00000428512 440 ntBASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 TDGF1P1-201ENST00000445734 527 ntBASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 AC069499.1-201ENST00000489433 509 ntBASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 AC126177.3-201ENST00000551839 688 ntBASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 MIR378J-201ENST00000611988 109 ntBASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 AL596275.2-204ENST00000641628 552 ntBASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.39□□□□□ -1.55
NEDD1Q8NHV4 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 AL672167.1-204ENST00000641875 3017 ntBASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 RNU6-1020P-201ENST00000363684 107 ntBASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 U3.22-201ENST00000391120 215 ntBASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 RPS29P13-201ENST00000402041 169 ntBASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 HMGN1P24-201ENST00000412282 298 ntBASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 RPL7AP25-201ENST00000423357 805 ntBASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 RPL18P10-201ENST00000425606 538 ntBASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 AC016712.1-201ENST00000431088 378 ntBASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 TRBV26-201ENST00000456572 344 ntBASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 NDUFB4P9-201ENST00000511646 388 ntBASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 AC006272.2-201ENST00000594725 163 ntBASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 RPL23AP92-201ENST00000603609 255 ntBASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 AL138889.2-201ENST00000603883 242 ntBASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 AC005191.1-201ENST00000603950 358 ntBASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC5.38□□□□□ -1.55
NEDD1Q8NHV4 uc_338.9-201ENST00000617424 182 ntBASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms