Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RNU5D-1-201ENST00000363299 116 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 SNORA67.5-201ENST00000391036 107 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 RPL7P30-201ENST00000420888 709 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 GPM6BP3-201ENST00000442797 145 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AL359385.1-201ENST00000456509 365 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC008676.3-201ENST00000521237 435 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 OR4R1P-201ENST00000529879 463 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC084033.1-201ENST00000550830 633 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 FAM106DP-201ENST00000586416 501 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AL121917.1-203ENST00000605534 577 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC090970.3-201ENST00000612566 866 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AL157834.3-201ENST00000615543 103 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 STMN1P1-201ENST00000617809 440 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 VTRNA1-3-201ENST00000365645 89 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 RNU6-198P-201ENST00000384258 104 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC096533.1-201ENST00000411645 353 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 LINC01347-201ENST00000417964 355 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AL365400.1-201ENST00000431854 640 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 CDC42P1-201ENST00000456658 548 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 OR52A4P-203ENST00000498233 1014 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 DPRXP5-201ENST00000604662 539 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC009950.2-201ENST00000636548 183 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 MTND5P11-201ENST00000511037 1812 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 RNU6-891P-201ENST00000384280 111 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 Y_RNA.471-201ENST00000384312 102 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 RNU6-452P-201ENST00000384406 107 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 TMSB4XP8-201ENST00000402089 135 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 TMSB4XP6-201ENST00000415187 135 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 TMSB4XP1-201ENST00000424567 135 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AL121821.2-201ENST00000556081 394 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 HSPE1P7-201ENST00000604681 321 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 AC012150.2-201ENST00000621300 544 ntBASIC0.5□□□□□ -2.33
SYNE1Q8NF91 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
SYNE1Q8NF91 RNU6-193P-201ENST00000410977 107 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 SEPT2P1-201ENST00000419651 180 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC005534.2-201ENST00000431047 433 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC140059.1-201ENST00000489238 361 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 LSM6P2-201ENST00000552208 177 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AL009028.1-201ENST00000604895 802 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 RNU6-60P-201ENST00000364792 103 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AL589655.1-201ENST00000405398 482 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC092447.6-201ENST00000414578 210 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 MTCO3P4-201ENST00000419236 787 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 TMEM167AP1-201ENST00000423409 219 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 RFC5P1-201ENST00000454419 874 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC092989.1-201ENST00000481235 277 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC025768.1-201ENST00000510057 267 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC093752.1-206ENST00000511823 336 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC133963.2-201ENST00000513686 578 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 SNORA31.8-201ENST00000516327 108 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 RNA5SP471-201ENST00000516971 106 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 CYCSP26-201ENST00000534107 320 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 SUB1P4-201ENST00000566062 339 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 RNU1-105P-201ENST00000363470 161 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 Y_RNA.303-201ENST00000364998 94 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 SLC44A3-AS1-205ENST00000424505 612 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC087879.1-201ENST00000474343 374 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 SNORA31.13-201ENST00000516624 135 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC109446.2-201ENST00000567872 497 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC005498.1-201ENST00000592125 465 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AL133507.1-201ENST00000605269 557 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 MIR98-201ENST00000606724 119 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 Y_RNA.85-201ENST00000363014 111 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 SNORA14A-201ENST00000364773 135 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 AC019129.1-201ENST00000403786 261 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 U3.40-201ENST00000408706 208 ntBASIC0.49□□□□□ -2.33
SYNE1Q8NF91 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC0.49□□□□□ -2.33
SYNE1Q8NF91 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms