Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC087369.1-201ENST00000520775 996 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 AC011979.2-201ENST00000527568 352 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 OR5B10P-201ENST00000532869 642 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 ELOCP31-201ENST00000540463 467 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 AC128657.1-201ENST00000549459 145 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 AL118558.2-201ENST00000556294 238 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 RPL21P12-201ENST00000559810 515 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 MIR3171-201ENST00000584270 74 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 AC244505.7-201ENST00000599675 272 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 AL022345.1-201ENST00000607292 135 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 AC130324.3-201ENST00000614165 542 ntBASIC4□□□□□ -1.77
SLC44A3Q8N4M1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4□□□□□ -1.77
SLC44A3Q8N4M1 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 AC007529.1-201ENST00000418574 2178 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 RNA5SP502-201ENST00000362694 119 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 SNORD74.4-201ENST00000364129 80 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 SNORA62.1-201ENST00000364287 154 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 Y_RNA.301-201ENST00000364990 103 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 Y_RNA.384-201ENST00000383909 102 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 RNU6-474P-201ENST00000384243 107 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 MIR606-201ENST00000384851 96 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 MIR218-2-201ENST00000385006 110 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 MIR634-201ENST00000385208 97 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 Y_RNA.579-201ENST00000390939 94 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 SNORA75.4-201ENST00000391278 119 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 RNU4-26P-201ENST00000410270 107 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 RNU2-15P-201ENST00000410692 191 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 GTF2IP13-201ENST00000438487 386 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 AC006480.1-201ENST00000449887 378 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 AL118520.1-201ENST00000450770 291 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 PPP1R2P5-201ENST00000457256 603 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 RPL21P99-201ENST00000480369 423 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 AC091885.1-201ENST00000506658 268 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 AC110792.2-201ENST00000510278 224 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 AP001804.3-201ENST00000525146 880 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 SNRPGP17-201ENST00000603780 214 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 AC025588.3-201ENST00000604182 274 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 TAB3P1-202ENST00000452645 1634 ntBASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.99□□□□□ -1.77
SLC44A3Q8N4M1 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 AC073343.1-201ENST00000328239 651 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 Y_RNA.259-201ENST00000364619 101 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 RNA5SP51-201ENST00000364750 119 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 Y_RNA.339-201ENST00000365325 102 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 RPL7AP73-201ENST00000413490 353 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 RPS23P10-201ENST00000416185 486 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 RPS3AP52-201ENST00000435639 297 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 BRK1P2-201ENST00000442875 223 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 AC016696.1-201ENST00000446949 318 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 RNU7-182P-201ENST00000459009 62 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 COX7A2P2-201ENST00000505291 250 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 AC116562.3-201ENST00000506136 177 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 AC017037.2-201ENST00000513850 890 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 GMPSP1-201ENST00000514075 579 ntBASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.98□□□□□ -1.77
SLC44A3Q8N4M1 AC068587.5-201ENST00000528506 175 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms