Protein–RNA interactions for Protein: Q6PEY1

TMEM88, Transmembrane protein 88, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88Q6PEY1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 AC012618.3-205ENST00000637896 1496 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 Y_RNA.157-201ENST00000363638 102 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 U1.1-201ENST00000384101 164 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 RNA5SP332-201ENST00000391063 115 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 RPS16P5-201ENST00000406501 404 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 EEF1A1P40-201ENST00000412883 573 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 AC063979.1-201ENST00000415539 377 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 SRIP2-201ENST00000428470 166 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 GPM6BP2-201ENST00000432046 144 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 HMGN2P20-201ENST00000437531 273 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 HSFY6P-201ENST00000445573 403 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 GPM6BP1-201ENST00000446387 144 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 MTND5P20-201ENST00000448677 143 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 AC073264.2-201ENST00000448886 166 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 AL590639.1-201ENST00000456484 337 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 RNA5SP310-201ENST00000459084 116 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 HMGN2P26-201ENST00000463169 339 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 TRBV1-201ENST00000476502 284 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 CEACAMP10-202ENST00000495431 496 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 RNU1-6P-201ENST00000516290 144 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 IGKV2-38-201ENST00000517443 247 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 BTF3P12-201ENST00000519620 469 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 AL110118.1-201ENST00000553543 400 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 TRAV28-201ENST00000557548 323 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 MIR3186-201ENST00000577404 85 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 MIR5699-201ENST00000578903 90 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 MIR4330-201ENST00000579077 105 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 AC018638.8-201ENST00000588755 281 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 AC009570.1-201ENST00000609599 745 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 XIST_intron.1-201ENST00000619444 68 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 MIR6853-201ENST00000619642 74 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 SNORD39.4-201ENST00000620099 78 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 AP003400.5-201ENST00000624827 617 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 AP005264.7-201ENST00000625003 745 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 AL353746.1-201ENST00000566293 6881 ntBASIC3.37□□□□□ -1.87
TMEM88Q6PEY1 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AC007256.1-201ENST00000392253 2765 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AL590240.1-201ENST00000334118 313 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 MIR192-201ENST00000384915 110 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 MIR591-201ENST00000385290 95 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 SNORD66.1-201ENST00000391230 76 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 PPIAP31-201ENST00000405422 495 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 RPS4XP7-201ENST00000406274 780 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 MTHFD2P2-201ENST00000407725 247 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 RNU4-26P-201ENST00000410270 107 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 RNU6-1148P-201ENST00000410992 104 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 RPL26P29-201ENST00000415623 438 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 RPL21P90-201ENST00000415692 466 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AL590139.1-201ENST00000416267 400 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 RBMY1KP-201ENST00000423480 476 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 ATP5HP2-201ENST00000433885 485 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AL512844.2-201ENST00000433990 593 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AC005154.2-201ENST00000438110 379 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AC016831.4-201ENST00000438302 307 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AC098614.3-201ENST00000438957 440 ntBASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.36□□□□□ -1.87
TMEM88Q6PEY1 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms