Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 RNU6-879P-201ENST00000364328 108 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 RNU6-21P-201ENST00000384710 107 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 RNU1-139P-201ENST00000391307 165 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 U3.39-201ENST00000408569 239 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 RNU4-30P-201ENST00000410245 143 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 RNU6-1135P-201ENST00000411083 103 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 BMS1P22-201ENST00000414726 313 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 AC140479.3-201ENST00000418944 1126 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 RPL12P12-201ENST00000424633 501 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 AC099677.3-201ENST00000427081 395 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 AC007679.3-201ENST00000434035 414 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 EIF5AP4-201ENST00000441206 465 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 AC092798.1-201ENST00000458542 409 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 AC073901.1-201ENST00000462471 408 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 AL591473.1-201ENST00000464297 313 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 AP002453.1-201ENST00000492327 668 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 AC004980.4-201ENST00000513375 203 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 RNU4-60P-201ENST00000517239 135 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 AC026956.1-201ENST00000558741 396 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 RPL23AP88-201ENST00000605759 454 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 SNORD96A-201ENST00000606577 79 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 AC025574.2-201ENST00000615621 514 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 Clostridiales-1.2-201ENST00000636724 160 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 AL592182.3-201ENST00000642132 3304 ntBASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDPF1Q6NVV7 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 RNA5SP77-201ENST00000365394 120 ntBASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 RNU6-514P-201ENST00000384208 107 ntBASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 RNA5SP213-201ENST00000391031 106 ntBASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 AC079780.1-201ENST00000428259 207 ntBASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 GAPDHP59-201ENST00000435908 267 ntBASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 NUTF2P3-201ENST00000448540 384 ntBASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 GEMIN2P1-201ENST00000454246 752 ntBASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 RNA5SP290-201ENST00000517133 127 ntBASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 AL162431.4-201ENST00000604674 411 ntBASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 MIR6085-201ENST00000618314 110 ntBASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 CPS1-IT1-201ENST00000628368 2306 ntBASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 AC009541.1-201ENST00000438279 2662 ntBASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CDPF1Q6NVV7 AL139811.1-201ENST00000424779 2299 ntBASIC4.26□□□□□ -1.73
CDPF1Q6NVV7 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CDPF1Q6NVV7 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CDPF1Q6NVV7 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
CDPF1Q6NVV7 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms