Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
USPL1Q5W0Q7 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 RNA5SP124-201ENST00000362739 110 ntBASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 RNA5SP307-201ENST00000362863 116 ntBASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 Y_RNA.333-201ENST00000365274 102 ntBASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 SNORA75B-201ENST00000384053 137 ntBASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 RNA5SP372-201ENST00000390836 115 ntBASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 SNORA16.2-201ENST00000390991 127 ntBASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 AC110754.1-201ENST00000399740 601 ntBASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 NDUFS5P1-201ENST00000405668 289 ntBASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 RNU6-985P-201ENST00000410182 104 ntBASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 RNU4-6P-201ENST00000410804 122 ntBASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 RPS12P24-201ENST00000412619 387 ntBASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 MRPS18BP2-201ENST00000434310 759 ntBASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 CYCSP43-201ENST00000438233 310 ntBASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 AL133547.1-201ENST00000448546 220 ntBASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 SNORA25.10-201ENST00000515926 124 ntBASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 RNU6-1095P-201ENST00000516148 108 ntBASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 MIR5692C1-201ENST00000585309 91 ntBASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 AC104763.2-201ENST00000604179 382 ntBASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 PISRT1.1-201ENST00000616930 107 ntBASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 AC087588.2-201ENST00000617667 426 ntBASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 MIR6500-201ENST00000622700 86 ntBASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.34□□□□□ -1.55
USPL1Q5W0Q7 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.56
USPL1Q5W0Q7 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 Y_RNA.5-201ENST00000362334 102 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 RNU6-1155P-201ENST00000363554 107 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 SNORD46.1-201ENST00000364139 104 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 Y_RNA.252-201ENST00000364556 101 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 RNU6-701P-201ENST00000384059 107 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 SNORA70E-201ENST00000384492 135 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 CISD1P1-201ENST00000393907 327 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 Y_RNA.646-201ENST00000410980 101 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 MTCYBP10-201ENST00000424905 650 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 RPL23AP25-201ENST00000430973 463 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 AC008264.1-201ENST00000447612 367 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 RPL7L1P1-201ENST00000448259 785 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 RNA5SP246-201ENST00000458909 119 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 AP001086.1-201ENST00000494882 321 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 AC026801.1-201ENST00000497178 464 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 AC104136.1-201ENST00000512969 394 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 RNU2-69P-201ENST00000516061 100 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 Y_RNA.708-201ENST00000516950 96 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 AP003122.3-201ENST00000526316 255 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 AC068446.3-201ENST00000555285 382 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 RPL23AP84-201ENST00000571193 464 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 MIR4680-201ENST00000580906 66 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 7SK.7-201ENST00000603504 247 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 ATP1B3P1-201ENST00000605365 821 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 DUSP12P1-201ENST00000612874 516 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 AC067931.1-201ENST00000624190 671 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 AC093591.2-201ENST00000565254 3843 ntBASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
USPL1Q5W0Q7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 CRP-202ENST00000368110 667 ntTSL 3 BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 RNU6-190P-201ENST00000384154 102 ntBASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 MRPL42P3-201ENST00000401492 326 ntBASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 MCFD2P1-201ENST00000417812 300 ntBASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 AC099677.1-201ENST00000420575 175 ntBASIC5.32□□□□□ -1.56
USPL1Q5W0Q7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms