Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 Y_RNA.86-201ENST00000363020 111 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 RNU6-1097P-201ENST00000363586 107 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 RNU6-116P-201ENST00000384042 109 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 MIR558-201ENST00000384920 94 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 RPS4XP8-201ENST00000402039 771 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 RNU6-908P-201ENST00000410160 94 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 AL139247.1-201ENST00000422768 325 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 AC008850.1-201ENST00000427546 362 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 MTATP6P4-201ENST00000427725 675 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 OR2AS1P-201ENST00000427827 319 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 HSPD1P21-201ENST00000436541 245 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 AL121871.1-201ENST00000443413 436 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 RNU7-170P-201ENST00000459303 61 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 RN7SL293P-201ENST00000481765 281 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 MLLT10P2-201ENST00000506434 249 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 RNU6-390P-201ENST00000516259 103 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 OR5AL2P-201ENST00000532185 920 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 AP003034.1-201ENST00000534621 422 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 AC005261.5-201ENST00000596280 355 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 BNIP3P10-201ENST00000605360 577 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 U3.45-201ENST00000607547 219 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 U6.105-201ENST00000637379 88 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 AC024614.3-201ENST00000637860 256 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 MTCO1P12-201ENST00000414273 1543 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 AC066616.2-201ENST00000559334 1481 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 AL157700.1-201ENST00000561973 1432 ntBASIC4.04□□□□□ -1.76
SLC44A4Q53GD3 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 HSPE1P11-201ENST00000339579 310 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 RNU6-223P-201ENST00000362830 107 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 RNU6-76P-201ENST00000384060 104 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AC110754.1-201ENST00000399740 601 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AL591416.1-201ENST00000404015 867 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AL359634.1-202ENST00000404721 284 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AL591419.1-201ENST00000427423 339 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 MTATP6P16-201ENST00000434543 526 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 RPS20P5-201ENST00000434808 360 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AC079781.2-201ENST00000446424 169 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AL133162.1-201ENST00000463228 453 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AC106707.2-201ENST00000484182 374 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AC069499.1-201ENST00000489433 509 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AC078918.1-201ENST00000498515 228 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 HSPD1P15-201ENST00000505573 1122 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 RNU2-10P-201ENST00000516375 211 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AC109635.4-202ENST00000531666 412 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 SNRPGP16-201ENST00000533275 226 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AC034105.3-201ENST00000565294 442 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 RPS3AP23-202ENST00000574601 686 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 NRBF2P5-201ENST00000603087 788 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AL162413.1-201ENST00000603198 110 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AP001330.4-201ENST00000604350 154 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AC007621.1-201ENST00000604544 437 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AC135507.2-201ENST00000612443 309 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 SNHG22-203ENST00000617833 660 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 MIR7702-201ENST00000621931 59 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 FER-210ENST00000628534 558 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 AC138649.5-201ENST00000637456 137 ntBASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
SLC44A4Q53GD3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms