Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC38Q502W7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC38Q502W7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC38Q502W7 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.74□□□□□ -1.81
CCDC38Q502W7 HSPE1P7-201ENST00000604681 321 ntBASIC3.74□□□□□ -1.81
CCDC38Q502W7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC38Q502W7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC38Q502W7 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC38Q502W7 AC007656.2-201ENST00000624902 4547 ntBASIC3.74□□□□□ -1.81
CCDC38Q502W7 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC38Q502W7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.73□□□□□ -1.81
CCDC38Q502W7 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC38Q502W7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC38Q502W7 RNA5SP42-201ENST00000364278 115 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 Y_RNA.296-201ENST00000364930 108 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 RNU6-641P-201ENST00000384006 107 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 Y_RNA.517-201ENST00000384551 106 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 MIR23B-201ENST00000384832 97 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 MIR554-201ENST00000384874 96 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 GSTA9P-201ENST00000406231 611 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 RNU6-1077P-201ENST00000410506 102 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 RNA5SP38-201ENST00000410750 119 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 AL591419.1-201ENST00000427423 339 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 AL158071.1-201ENST00000430315 461 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 MTCO2P11-201ENST00000431069 680 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 RPS20P5-201ENST00000434808 360 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 PRDX3P3-201ENST00000447765 522 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 MTCYBP1-201ENST00000454315 1119 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.73□□□□□ -1.81
CCDC38Q502W7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.73□□□□□ -1.81
CCDC38Q502W7 AC023194.1-201ENST00000493084 308 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 AC026427.2-201ENST00000506228 536 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 AC117522.1-201ENST00000509821 380 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 DUXAP2-201ENST00000519198 589 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 RANP9-201ENST00000519957 271 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC38Q502W7 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.73□□□□□ -1.81
CCDC38Q502W7 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC38Q502W7 HMGB1P6-201ENST00000569046 646 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC38Q502W7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC38Q502W7 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC38Q502W7 AC107294.1-201ENST00000609524 467 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC38Q502W7 AC015540.1-201ENST00000615828 501 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.73□□□□□ -1.81
CCDC38Q502W7 AC034229.5-201ENST00000624258 185 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC38Q502W7 AL392088.2-201ENST00000637607 285 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 AP000553.6-201ENST00000641242 118 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CCDC38Q502W7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.73□□□□□ -1.81
CCDC38Q502W7 MTND5P26-201ENST00000426018 1752 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 AP004289.2-201ENST00000444413 1457 ntBASIC3.73□□□□□ -1.81
CCDC38Q502W7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
CCDC38Q502W7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
CCDC38Q502W7 AL513302.2-201ENST00000562313 1842 ntBASIC3.72□□□□□ -1.81
CCDC38Q502W7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
CCDC38Q502W7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
CCDC38Q502W7 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CCDC38Q502W7 RN7SKP202-201ENST00000410439 330 ntBASIC3.72□□□□□ -1.81
CCDC38Q502W7 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC38Q502W7 AC012498.1-201ENST00000424037 437 ntBASIC3.72□□□□□ -1.81
CCDC38Q502W7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC38Q502W7 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC38Q502W7 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC38Q502W7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC38Q502W7 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC38Q502W7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC38Q502W7 RN7SL442P-201ENST00000473804 320 ntBASIC3.72□□□□□ -1.81
CCDC38Q502W7 RN7SL132P-201ENST00000478131 296 ntBASIC3.72□□□□□ -1.81
CCDC38Q502W7 AC108078.1-201ENST00000508073 725 ntBASIC3.72□□□□□ -1.81
CCDC38Q502W7 RNA5SP290-201ENST00000517133 127 ntBASIC3.72□□□□□ -1.81
CCDC38Q502W7 RNU1-45P-201ENST00000517191 141 ntBASIC3.72□□□□□ -1.81
CCDC38Q502W7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC38Q502W7 HIGD1AP1-201ENST00000550979 275 ntBASIC3.72□□□□□ -1.81
CCDC38Q502W7 AMZ2P1-203ENST00000565833 850 ntBASIC3.72□□□□□ -1.81
CCDC38Q502W7 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC38Q502W7 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.72□□□□□ -1.81
CCDC38Q502W7 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.72□□□□□ -1.81
CCDC38Q502W7 AC098826.3-201ENST00000603823 466 ntBASIC3.72□□□□□ -1.81
CCDC38Q502W7 AC005344.1-201ENST00000613391 459 ntBASIC3.72□□□□□ -1.81
CCDC38Q502W7 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CCDC38Q502W7 AC138649.3-201ENST00000622154 254 ntBASIC3.72□□□□□ -1.81
CCDC38Q502W7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.72□□□□□ -1.81
CCDC38Q502W7 SRP72P2-201ENST00000344851 1979 ntBASIC3.72□□□□□ -1.81
CCDC38Q502W7 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.72□□□□□ -1.81
CCDC38Q502W7 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
CCDC38Q502W7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.71□□□□□ -1.82
CCDC38Q502W7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC38Q502W7 AC005183.1-201ENST00000603687 1979 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 UBE2L2-201ENST00000254302 429 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC38Q502W7 Y_RNA.245-201ENST00000364493 95 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 SNORA62.3-201ENST00000365110 153 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 AP002088.1-201ENST00000382740 395 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 RNU6-1103P-201ENST00000384150 107 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 RNU6-456P-201ENST00000384493 107 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 RPL32P23-201ENST00000397237 405 ntBASIC3.71□□□□□ -1.82
CCDC38Q502W7 RN7SKP156-201ENST00000410308 342 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms