Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AC020895.1-201ENST00000595362 272 ntBASIC2.86□□□□□ -1.95
SRP54P61011 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.86□□□□□ -1.95
SRP54P61011 AC012119.1-201ENST00000603184 222 ntBASIC2.86□□□□□ -1.95
SRP54P61011 AC105148.1-201ENST00000604961 409 ntBASIC2.86□□□□□ -1.95
SRP54P61011 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.86□□□□□ -1.95
SRP54P61011 AC007038.2-201ENST00000608095 740 ntBASIC2.86□□□□□ -1.95
SRP54P61011 AP000240.1-201ENST00000609910 452 ntBASIC2.86□□□□□ -1.95
SRP54P61011 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
SRP54P61011 AL607023.1-201ENST00000620045 248 ntBASIC2.86□□□□□ -1.95
SRP54P61011 AC012150.2-201ENST00000621300 544 ntBASIC2.86□□□□□ -1.95
SRP54P61011 AC007998.5-201ENST00000622938 237 ntBASIC2.86□□□□□ -1.95
SRP54P61011 AC112204.3-201ENST00000623822 332 ntBASIC2.86□□□□□ -1.95
SRP54P61011 AC091965.5-201ENST00000624785 342 ntBASIC2.86□□□□□ -1.95
SRP54P61011 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.86□□□□□ -1.95
SRP54P61011 AP003399.1-201ENST00000637534 361 ntBASIC2.86□□□□□ -1.95
SRP54P61011 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
SRP54P61011 ZNF519P1-201ENST00000449011 1626 ntBASIC2.86□□□□□ -1.95
SRP54P61011 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.86□□□□□ -1.95
SRP54P61011 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SRP54P61011 AL391994.1-201ENST00000254724 282 ntBASIC2.85□□□□□ -1.95
SRP54P61011 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
SRP54P61011 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
SRP54P61011 Y_RNA.18-201ENST00000362461 102 ntBASIC2.85□□□□□ -1.95
SRP54P61011 RNY4P24-201ENST00000362735 96 ntBASIC2.85□□□□□ -1.95
SRP54P61011 Y_RNA.302-201ENST00000364997 102 ntBASIC2.85□□□□□ -1.95
SRP54P61011 SNORA18.3-201ENST00000384122 132 ntBASIC2.85□□□□□ -1.95
SRP54P61011 HMGN2P35-201ENST00000412164 270 ntBASIC2.85□□□□□ -1.95
SRP54P61011 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.85□□□□□ -1.95
SRP54P61011 RPL21P24-201ENST00000413752 448 ntBASIC2.85□□□□□ -1.95
SRP54P61011 HMGB1P11-201ENST00000413899 637 ntBASIC2.85□□□□□ -1.95
SRP54P61011 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.85□□□□□ -1.95
SRP54P61011 AC236972.1-201ENST00000433225 199 ntBASIC2.85□□□□□ -1.95
SRP54P61011 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.85□□□□□ -1.95
SRP54P61011 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.85□□□□□ -1.95
SRP54P61011 LARP1BP3-201ENST00000437229 869 ntBASIC2.85□□□□□ -1.95
SRP54P61011 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.85□□□□□ -1.95
SRP54P61011 AC020550.1-201ENST00000447385 163 ntBASIC2.85□□□□□ -1.95
SRP54P61011 AC013267.1-201ENST00000458227 267 ntBASIC2.85□□□□□ -1.95
SRP54P61011 AC087588.1-201ENST00000462203 316 ntBASIC2.85□□□□□ -1.95
SRP54P61011 RPL23AP41-201ENST00000484754 458 ntBASIC2.85□□□□□ -1.95
SRP54P61011 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.85□□□□□ -1.95
SRP54P61011 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.85□□□□□ -1.95
SRP54P61011 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SRP54P61011 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.85□□□□□ -1.95
SRP54P61011 AC100870.1-201ENST00000522035 505 ntBASIC2.85□□□□□ -1.95
SRP54P61011 MTATP6P15-201ENST00000527233 835 ntBASIC2.85□□□□□ -1.95
SRP54P61011 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.85□□□□□ -1.95
SRP54P61011 AC090888.2-201ENST00000559765 1144 ntBASIC2.85□□□□□ -1.95
SRP54P61011 AC090888.1-201ENST00000561335 1141 ntBASIC2.85□□□□□ -1.95
SRP54P61011 AC068790.3-201ENST00000602988 553 ntBASIC2.85□□□□□ -1.95
SRP54P61011 AC112187.2-201ENST00000604345 283 ntBASIC2.85□□□□□ -1.95
SRP54P61011 AC013244.3-201ENST00000605614 388 ntBASIC2.85□□□□□ -1.95
SRP54P61011 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.85□□□□□ -1.95
SRP54P61011 AC239868.4-201ENST00000608318 671 ntBASIC2.85□□□□□ -1.95
SRP54P61011 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SRP54P61011 AC006378.2-201ENST00000623178 2476 ntBASIC2.85□□□□□ -1.95
SRP54P61011 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.85□□□□□ -1.95
SRP54P61011 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
SRP54P61011 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
SRP54P61011 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.85□□□□□ -1.95
SRP54P61011 CCT4P2-201ENST00000233836 1548 ntBASIC2.84□□□□□ -1.95
SRP54P61011 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SRP54P61011 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
SRP54P61011 Y_RNA.500-201ENST00000384466 111 ntBASIC2.84□□□□□ -1.95
SRP54P61011 RNU6-253P-201ENST00000384730 105 ntBASIC2.84□□□□□ -1.95
SRP54P61011 SNORA46-201ENST00000384762 135 ntBASIC2.84□□□□□ -1.95
SRP54P61011 RNA5SP354-201ENST00000391247 136 ntBASIC2.84□□□□□ -1.95
SRP54P61011 AL139095.1-201ENST00000404326 391 ntBASIC2.84□□□□□ -1.95
SRP54P61011 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.84□□□□□ -1.95
SRP54P61011 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.84□□□□□ -1.95
SRP54P61011 AC105272.1-201ENST00000438604 198 ntBASIC2.84□□□□□ -1.95
SRP54P61011 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.84□□□□□ -1.95
SRP54P61011 DDX3P2-201ENST00000446138 111 ntBASIC2.84□□□□□ -1.95
SRP54P61011 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.84□□□□□ -1.95
SRP54P61011 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.84□□□□□ -1.95
SRP54P61011 AL160314.1-201ENST00000490836 438 ntBASIC2.84□□□□□ -1.95
SRP54P61011 RPS27P26-201ENST00000494583 239 ntBASIC2.84□□□□□ -1.95
SRP54P61011 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.84□□□□□ -1.95
SRP54P61011 RNA5SP356-201ENST00000515972 94 ntBASIC2.84□□□□□ -1.95
SRP54P61011 RNU6-927P-201ENST00000516199 100 ntBASIC2.84□□□□□ -1.95
SRP54P61011 RNU6-826P-201ENST00000516827 104 ntBASIC2.84□□□□□ -1.95
SRP54P61011 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.84□□□□□ -1.95
SRP54P61011 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.84□□□□□ -1.95
SRP54P61011 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
SRP54P61011 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.84□□□□□ -1.95
SRP54P61011 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.84□□□□□ -1.95
SRP54P61011 CYCSP39-201ENST00000565821 309 ntBASIC2.84□□□□□ -1.95
SRP54P61011 AC008739.2-201ENST00000597006 317 ntBASIC2.84□□□□□ -1.95
SRP54P61011 AC024153.1-201ENST00000603103 365 ntBASIC2.84□□□□□ -1.95
SRP54P61011 AC136601.2-201ENST00000604356 474 ntBASIC2.84□□□□□ -1.95
SRP54P61011 AC091965.4-201ENST00000607691 587 ntBASIC2.84□□□□□ -1.95
SRP54P61011 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
SRP54P61011 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.83□□□□□ -1.96
SRP54P61011 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.83□□□□□ -1.96
SRP54P61011 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SRP54P61011 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.83□□□□□ -1.96
SRP54P61011 AC138915.1-201ENST00000565427 1685 ntBASIC2.83□□□□□ -1.96
SRP54P61011 SNORD21-201ENST00000383953 95 ntBASIC2.83□□□□□ -1.96
SRP54P61011 RNU1-109P-201ENST00000383960 147 ntBASIC2.83□□□□□ -1.96
SRP54P61011 RNU6-1200P-201ENST00000384162 107 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms