Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 PPP1R11P2-201ENST00000423543 382 ntBASIC1.91□□□□□ -2.1
ACTBP60709 AIMP1P2-201ENST00000425294 312 ntBASIC1.91□□□□□ -2.1
ACTBP60709 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.91□□□□□ -2.1
ACTBP60709 RPS15AP5-201ENST00000436276 388 ntBASIC1.91□□□□□ -2.1
ACTBP60709 AL096829.2-201ENST00000446582 742 ntBASIC1.91□□□□□ -2.1
ACTBP60709 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.91□□□□□ -2.1
ACTBP60709 AC005297.2-201ENST00000450430 606 ntBASIC1.91□□□□□ -2.1
ACTBP60709 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.91□□□□□ -2.1
ACTBP60709 RNU6-717P-201ENST00000459076 104 ntBASIC1.91□□□□□ -2.1
ACTBP60709 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.91□□□□□ -2.1
ACTBP60709 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.91□□□□□ -2.1
ACTBP60709 LARP1BP2-201ENST00000486594 519 ntBASIC1.91□□□□□ -2.1
ACTBP60709 AC234781.5-201ENST00000508429 271 ntBASIC1.91□□□□□ -2.1
ACTBP60709 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC1.91□□□□□ -2.1
ACTBP60709 RNU6-1256P-201ENST00000516539 103 ntBASIC1.91□□□□□ -2.1
ACTBP60709 SCARNA3-201ENST00000517097 143 ntBASIC1.91□□□□□ -2.1
ACTBP60709 RNU6-1261P-201ENST00000517194 104 ntBASIC1.91□□□□□ -2.1
ACTBP60709 AC025755.1-201ENST00000521306 278 ntBASIC1.91□□□□□ -2.1
ACTBP60709 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ACTBP60709 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.91□□□□□ -2.1
ACTBP60709 AC044913.1-201ENST00000557200 430 ntBASIC1.91□□□□□ -2.1
ACTBP60709 AC027176.1-201ENST00000560204 514 ntBASIC1.91□□□□□ -2.1
ACTBP60709 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.91□□□□□ -2.1
ACTBP60709 MIR3199-1-201ENST00000582434 88 ntBASIC1.91□□□□□ -2.1
ACTBP60709 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
ACTBP60709 AC090330.1-201ENST00000588646 764 ntBASIC1.91□□□□□ -2.1
ACTBP60709 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.91□□□□□ -2.1
ACTBP60709 AP001542.2-201ENST00000593141 364 ntBASIC1.91□□□□□ -2.1
ACTBP60709 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
ACTBP60709 AL627230.6-201ENST00000611129 280 ntBASIC1.91□□□□□ -2.1
ACTBP60709 AL354696.1-201ENST00000614652 497 ntBASIC1.91□□□□□ -2.1
ACTBP60709 AL157770.1-201ENST00000623049 439 ntBASIC1.91□□□□□ -2.1
ACTBP60709 AP002791.1-201ENST00000623291 381 ntBASIC1.91□□□□□ -2.1
ACTBP60709 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.91□□□□□ -2.1
ACTBP60709 MIR4275-201ENST00000636486 87 ntBASIC1.91□□□□□ -2.1
ACTBP60709 MKKS-204ENST00000639674 192 ntBASIC1.91□□□□□ -2.1
ACTBP60709 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
ACTBP60709 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
ACTBP60709 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.91□□□□□ -2.1
ACTBP60709 AC004520.1-201ENST00000608362 1413 ntBASIC1.91□□□□□ -2.1
ACTBP60709 MIR449A-201ENST00000362113 91 ntBASIC1.9□□□□□ -2.11
ACTBP60709 RNU6-468P-201ENST00000384003 109 ntBASIC1.9□□□□□ -2.11
ACTBP60709 SNORA48.3-201ENST00000391081 134 ntBASIC1.9□□□□□ -2.11
ACTBP60709 HMGB1P17-201ENST00000403495 628 ntBASIC1.9□□□□□ -2.11
ACTBP60709 AL450338.1-201ENST00000407987 512 ntBASIC1.9□□□□□ -2.11
ACTBP60709 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.9□□□□□ -2.11
ACTBP60709 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC1.9□□□□□ -2.11
ACTBP60709 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.9□□□□□ -2.11
ACTBP60709 AL139413.1-201ENST00000421309 217 ntBASIC1.9□□□□□ -2.11
ACTBP60709 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.9□□□□□ -2.11
ACTBP60709 NANOGP5-201ENST00000424456 877 ntBASIC1.9□□□□□ -2.11
ACTBP60709 FO393414.1-201ENST00000428697 1184 ntBASIC1.9□□□□□ -2.11
ACTBP60709 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC1.9□□□□□ -2.11
ACTBP60709 MTND4P15-201ENST00000437913 1033 ntBASIC1.9□□□□□ -2.11
ACTBP60709 SDR42E1P3-201ENST00000438345 502 ntBASIC1.9□□□□□ -2.11
ACTBP60709 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.9□□□□□ -2.11
ACTBP60709 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.9□□□□□ -2.11
ACTBP60709 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.9□□□□□ -2.11
ACTBP60709 RPL39P6-201ENST00000448289 150 ntBASIC1.9□□□□□ -2.11
ACTBP60709 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.9□□□□□ -2.11
ACTBP60709 AC080013.2-201ENST00000460866 323 ntBASIC1.9□□□□□ -2.11
ACTBP60709 KLF3P2-201ENST00000465138 268 ntBASIC1.9□□□□□ -2.11
ACTBP60709 AC055731.1-201ENST00000474387 401 ntBASIC1.9□□□□□ -2.11
ACTBP60709 AC090453.1-201ENST00000495560 436 ntBASIC1.9□□□□□ -2.11
ACTBP60709 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
ACTBP60709 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.9□□□□□ -2.11
ACTBP60709 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.9□□□□□ -2.11
ACTBP60709 MRPS17P9-201ENST00000511924 393 ntBASIC1.9□□□□□ -2.11
ACTBP60709 AC027338.1-201ENST00000514840 825 ntBASIC1.9□□□□□ -2.11
ACTBP60709 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.9□□□□□ -2.11
ACTBP60709 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.9□□□□□ -2.11
ACTBP60709 AP001646.1-201ENST00000527936 915 ntBASIC1.9□□□□□ -2.11
ACTBP60709 AP003066.2-201ENST00000529375 555 ntBASIC1.9□□□□□ -2.11
ACTBP60709 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.9□□□□□ -2.11
ACTBP60709 MIR4287-201ENST00000579398 78 ntBASIC1.9□□□□□ -2.11
ACTBP60709 AC008749.1-201ENST00000597650 306 ntBASIC1.9□□□□□ -2.11
ACTBP60709 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.9□□□□□ -2.11
ACTBP60709 AC009159.1-201ENST00000618386 642 ntBASIC1.9□□□□□ -2.11
ACTBP60709 AC009831.4-201ENST00000620744 325 ntBASIC1.9□□□□□ -2.11
ACTBP60709 AC005858.4-201ENST00000623191 700 ntBASIC1.9□□□□□ -2.11
ACTBP60709 AC068057.2-201ENST00000624047 895 ntBASIC1.9□□□□□ -2.11
ACTBP60709 CTSLP2-204ENST00000629029 392 ntBASIC1.9□□□□□ -2.11
ACTBP60709 AL163152.1-201ENST00000642001 374 ntBASIC1.9□□□□□ -2.11
ACTBP60709 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.9□□□□□ -2.11
ACTBP60709 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.89□□□□□ -2.11
ACTBP60709 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
ACTBP60709 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
ACTBP60709 SNRPEP3-201ENST00000338402 276 ntBASIC1.89□□□□□ -2.11
ACTBP60709 HSPE1P11-201ENST00000339579 310 ntBASIC1.89□□□□□ -2.11
ACTBP60709 U3.12-201ENST00000364498 214 ntBASIC1.89□□□□□ -2.11
ACTBP60709 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
ACTBP60709 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
ACTBP60709 GSTA9P-201ENST00000406231 611 ntBASIC1.89□□□□□ -2.11
ACTBP60709 RNU6-1328P-201ENST00000410938 106 ntBASIC1.89□□□□□ -2.11
ACTBP60709 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.89□□□□□ -2.11
ACTBP60709 AC018630.2-202ENST00000422992 927 ntBASIC1.89□□□□□ -2.11
ACTBP60709 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.89□□□□□ -2.11
ACTBP60709 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
ACTBP60709 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.89□□□□□ -2.11
ACTBP60709 DYNLL1P5-201ENST00000467158 270 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms