Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AC105914.1-201ENST00000511798 226 ntBASIC2.94□□□□□ -1.94
PEX3P56589 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.94□□□□□ -1.94
PEX3P56589 SNORA31.8-201ENST00000516327 108 ntBASIC2.94□□□□□ -1.94
PEX3P56589 RNU6-1003P-201ENST00000517099 105 ntBASIC2.94□□□□□ -1.94
PEX3P56589 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.94□□□□□ -1.94
PEX3P56589 MTCO1P47-201ENST00000523889 1271 ntBASIC2.94□□□□□ -1.94
PEX3P56589 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.94□□□□□ -1.94
PEX3P56589 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.94□□□□□ -1.94
PEX3P56589 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.94□□□□□ -1.94
PEX3P56589 ROCK1P1-201ENST00000573767 549 ntBASIC2.94□□□□□ -1.94
PEX3P56589 MIR4635-201ENST00000583759 79 ntBASIC2.94□□□□□ -1.94
PEX3P56589 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC2.94□□□□□ -1.94
PEX3P56589 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.94□□□□□ -1.94
PEX3P56589 AC007998.5-201ENST00000622938 237 ntBASIC2.94□□□□□ -1.94
PEX3P56589 AC007494.3-201ENST00000624660 743 ntBASIC2.94□□□□□ -1.94
PEX3P56589 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
PEX3P56589 ASNSP3-201ENST00000451989 1306 ntBASIC2.93□□□□□ -1.94
PEX3P56589 AL138713.1-201ENST00000624026 2130 ntBASIC2.93□□□□□ -1.94
PEX3P56589 RNU6-1078P-201ENST00000364522 103 ntBASIC2.93□□□□□ -1.94
PEX3P56589 RNA5SP184-201ENST00000411071 108 ntBASIC2.93□□□□□ -1.94
PEX3P56589 AC078974.1-201ENST00000411597 223 ntBASIC2.93□□□□□ -1.94
PEX3P56589 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.93□□□□□ -1.94
PEX3P56589 NPM1P11-201ENST00000417106 855 ntBASIC2.93□□□□□ -1.94
PEX3P56589 AC090960.1-201ENST00000421072 306 ntBASIC2.93□□□□□ -1.94
PEX3P56589 NUP35P1-201ENST00000422734 947 ntBASIC2.93□□□□□ -1.94
PEX3P56589 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.93□□□□□ -1.94
PEX3P56589 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.93□□□□□ -1.94
PEX3P56589 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.93□□□□□ -1.94
PEX3P56589 RPL37P21-201ENST00000435890 276 ntBASIC2.93□□□□□ -1.94
PEX3P56589 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.93□□□□□ -1.94
PEX3P56589 AL049734.2-201ENST00000441066 616 ntBASIC2.93□□□□□ -1.94
PEX3P56589 COX6CP2-201ENST00000444980 225 ntBASIC2.93□□□□□ -1.94
PEX3P56589 RPL23AP20-201ENST00000447965 421 ntBASIC2.93□□□□□ -1.94
PEX3P56589 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.93□□□□□ -1.94
PEX3P56589 RPL23AP31-201ENST00000456160 467 ntBASIC2.93□□□□□ -1.94
PEX3P56589 AP1S2P1-201ENST00000457344 379 ntBASIC2.93□□□□□ -1.94
PEX3P56589 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.93□□□□□ -1.94
PEX3P56589 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.93□□□□□ -1.94
PEX3P56589 AC103783.1-201ENST00000520506 373 ntBASIC2.93□□□□□ -1.94
PEX3P56589 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.93□□□□□ -1.94
PEX3P56589 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.93□□□□□ -1.94
PEX3P56589 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.93□□□□□ -1.94
PEX3P56589 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.93□□□□□ -1.94
PEX3P56589 AC012435.1-202ENST00000568772 240 ntBASIC2.93□□□□□ -1.94
PEX3P56589 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.93□□□□□ -1.94
PEX3P56589 SNORD84-203ENST00000584275 78 ntBASIC2.93□□□□□ -1.94
PEX3P56589 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC2.93□□□□□ -1.94
PEX3P56589 AP001330.4-201ENST00000604350 154 ntBASIC2.93□□□□□ -1.94
PEX3P56589 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.93□□□□□ -1.94
PEX3P56589 AC107871.2-201ENST00000612894 502 ntBASIC2.93□□□□□ -1.94
PEX3P56589 CR381653.2-201ENST00000624041 768 ntBASIC2.93□□□□□ -1.94
PEX3P56589 SCARNA15.3-201ENST00000626315 122 ntBASIC2.93□□□□□ -1.94
PEX3P56589 SCARNA4.1-201ENST00000628597 123 ntBASIC2.93□□□□□ -1.94
PEX3P56589 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.93□□□□□ -1.94
PEX3P56589 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
PEX3P56589 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
PEX3P56589 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
PEX3P56589 RNY4P24-201ENST00000362735 96 ntBASIC2.92□□□□□ -1.94
PEX3P56589 Y_RNA.510-201ENST00000384511 114 ntBASIC2.92□□□□□ -1.94
PEX3P56589 MIR34A-201ENST00000385130 110 ntBASIC2.92□□□□□ -1.94
PEX3P56589 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
PEX3P56589 RPS3AP26-201ENST00000398259 784 ntBASIC2.92□□□□□ -1.94
PEX3P56589 AL021407.1-201ENST00000404531 386 ntBASIC2.92□□□□□ -1.94
PEX3P56589 MTND1P21-201ENST00000412991 285 ntBASIC2.92□□□□□ -1.94
PEX3P56589 AC109780.2-201ENST00000413467 845 ntBASIC2.92□□□□□ -1.94
PEX3P56589 YPEL5P1-201ENST00000419731 367 ntBASIC2.92□□□□□ -1.94
PEX3P56589 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.92□□□□□ -1.94
PEX3P56589 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.92□□□□□ -1.94
PEX3P56589 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.92□□□□□ -1.94
PEX3P56589 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.92□□□□□ -1.94
PEX3P56589 AC024082.2-201ENST00000434771 238 ntBASIC2.92□□□□□ -1.94
PEX3P56589 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.92□□□□□ -1.94
PEX3P56589 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.92□□□□□ -1.94
PEX3P56589 Z83846.1-201ENST00000446798 265 ntBASIC2.92□□□□□ -1.94
PEX3P56589 TPT1P14-201ENST00000448018 505 ntBASIC2.92□□□□□ -1.94
PEX3P56589 AL109933.2-201ENST00000452651 260 ntBASIC2.92□□□□□ -1.94
PEX3P56589 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
PEX3P56589 AC055855.1-201ENST00000489563 579 ntBASIC2.92□□□□□ -1.94
PEX3P56589 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.92□□□□□ -1.94
PEX3P56589 MLLT10P2-201ENST00000506434 249 ntBASIC2.92□□□□□ -1.94
PEX3P56589 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.92□□□□□ -1.94
PEX3P56589 OR5BM1P-201ENST00000512021 366 ntBASIC2.92□□□□□ -1.94
PEX3P56589 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.92□□□□□ -1.94
PEX3P56589 AC118465.1-201ENST00000513820 1271 ntBASIC2.92□□□□□ -1.94
PEX3P56589 Y_RNA.688-201ENST00000516565 95 ntBASIC2.92□□□□□ -1.94
PEX3P56589 RNA5SP468-201ENST00000516782 93 ntBASIC2.92□□□□□ -1.94
PEX3P56589 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.92□□□□□ -1.94
PEX3P56589 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.92□□□□□ -1.94
PEX3P56589 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.92□□□□□ -1.94
PEX3P56589 SETP2-201ENST00000553886 926 ntBASIC2.92□□□□□ -1.94
PEX3P56589 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.92□□□□□ -1.94
PEX3P56589 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.92□□□□□ -1.94
PEX3P56589 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.92□□□□□ -1.94
PEX3P56589 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.92□□□□□ -1.94
PEX3P56589 AC060771.1-201ENST00000582031 164 ntBASIC2.92□□□□□ -1.94
PEX3P56589 Z99497.2-201ENST00000603634 310 ntBASIC2.92□□□□□ -1.94
PEX3P56589 AL355472.4-201ENST00000610233 626 ntBASIC2.92□□□□□ -1.94
PEX3P56589 AL110115.1-201ENST00000614396 364 ntBASIC2.92□□□□□ -1.94
PEX3P56589 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.92□□□□□ -1.94
PEX3P56589 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms