Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH13P55290 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH13P55290 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH13P55290 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH13P55290 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CDH13P55290 RNU5E-1-201ENST00000362477 120 ntBASIC3.12□□□□□ -1.91
CDH13P55290 U3.6-201ENST00000363622 211 ntBASIC3.12□□□□□ -1.91
CDH13P55290 RNA5SP50-201ENST00000363731 107 ntBASIC3.12□□□□□ -1.91
CDH13P55290 RNU6-1035P-201ENST00000384477 107 ntBASIC3.12□□□□□ -1.91
CDH13P55290 RNU6-297P-201ENST00000384636 107 ntBASIC3.12□□□□□ -1.91
CDH13P55290 MIR325-201ENST00000385260 98 ntBASIC3.12□□□□□ -1.91
CDH13P55290 RPL21P3-201ENST00000395517 478 ntBASIC3.12□□□□□ -1.91
CDH13P55290 NDUFS5P1-201ENST00000405668 289 ntBASIC3.12□□□□□ -1.91
CDH13P55290 AC012498.1-201ENST00000424037 437 ntBASIC3.12□□□□□ -1.91
CDH13P55290 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.12□□□□□ -1.91
CDH13P55290 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH13P55290 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH13P55290 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH13P55290 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH13P55290 AC009961.2-201ENST00000435771 251 ntBASIC3.12□□□□□ -1.91
CDH13P55290 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH13P55290 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.12□□□□□ -1.91
CDH13P55290 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH13P55290 RNU6-956P-201ENST00000458868 103 ntBASIC3.12□□□□□ -1.91
CDH13P55290 AC146507.2-201ENST00000460608 476 ntBASIC3.12□□□□□ -1.91
CDH13P55290 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH13P55290 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH13P55290 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH13P55290 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH13P55290 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH13P55290 ARL2BPP2-201ENST00000550907 489 ntBASIC3.12□□□□□ -1.91
CDH13P55290 RPL21P12-201ENST00000559810 515 ntBASIC3.12□□□□□ -1.91
CDH13P55290 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH13P55290 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.12□□□□□ -1.91
CDH13P55290 AC109347.2-201ENST00000610220 349 ntBASIC3.12□□□□□ -1.91
CDH13P55290 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.12□□□□□ -1.91
CDH13P55290 AL157817.1-201ENST00000614264 790 ntBASIC3.12□□□□□ -1.91
CDH13P55290 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.12□□□□□ -1.91
CDH13P55290 AC034102.8-201ENST00000615146 484 ntBASIC3.12□□□□□ -1.91
CDH13P55290 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CDH13P55290 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH13P55290 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.12□□□□□ -1.91
CDH13P55290 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.11□□□□□ -1.91
CDH13P55290 AL390237.1-201ENST00000404226 1415 ntBASIC3.11□□□□□ -1.91
CDH13P55290 RNU6-960P-201ENST00000364056 120 ntBASIC3.11□□□□□ -1.91
CDH13P55290 SNORA14A-201ENST00000364773 135 ntBASIC3.11□□□□□ -1.91
CDH13P55290 RNU6-217P-201ENST00000384164 104 ntBASIC3.11□□□□□ -1.91
CDH13P55290 Y_RNA.553-201ENST00000384670 102 ntBASIC3.11□□□□□ -1.91
CDH13P55290 MIR200C-201ENST00000384980 68 ntBASIC3.11□□□□□ -1.91
CDH13P55290 TRIAP1P1-201ENST00000427062 225 ntBASIC3.11□□□□□ -1.91
CDH13P55290 MTCO2P16-201ENST00000436962 677 ntBASIC3.11□□□□□ -1.91
CDH13P55290 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH13P55290 AL022238.1-201ENST00000442557 355 ntBASIC3.11□□□□□ -1.91
CDH13P55290 KATNBL1P3-201ENST00000443475 909 ntBASIC3.11□□□□□ -1.91
CDH13P55290 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH13P55290 AL136380.1-201ENST00000447970 162 ntBASIC3.11□□□□□ -1.91
CDH13P55290 GAPDHP17-201ENST00000449858 1001 ntBASIC3.11□□□□□ -1.91
CDH13P55290 RPL7P5-201ENST00000471472 736 ntBASIC3.11□□□□□ -1.91
CDH13P55290 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.11□□□□□ -1.91
CDH13P55290 RAP1BP2-201ENST00000478270 544 ntBASIC3.11□□□□□ -1.91
CDH13P55290 KC877373.1-201ENST00000479066 408 ntBASIC3.11□□□□□ -1.91
CDH13P55290 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH13P55290 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH13P55290 ARL2BPP4-201ENST00000506854 471 ntBASIC3.11□□□□□ -1.91
CDH13P55290 RNU6-1092P-201ENST00000516955 87 ntBASIC3.11□□□□□ -1.91
CDH13P55290 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH13P55290 AP006587.4-201ENST00000526053 529 ntBASIC3.11□□□□□ -1.91
CDH13P55290 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.11□□□□□ -1.91
CDH13P55290 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH13P55290 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH13P55290 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.11□□□□□ -1.91
CDH13P55290 AP005136.1-201ENST00000579765 429 ntBASIC3.11□□□□□ -1.91
CDH13P55290 MIR2682-201ENST00000580305 110 ntBASIC3.11□□□□□ -1.91
CDH13P55290 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC3.11□□□□□ -1.91
CDH13P55290 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH13P55290 AC090578.1-201ENST00000604955 591 ntBASIC3.11□□□□□ -1.91
CDH13P55290 U3.45-201ENST00000607547 219 ntBASIC3.11□□□□□ -1.91
CDH13P55290 AL355365.1-201ENST00000616480 294 ntBASIC3.11□□□□□ -1.91
CDH13P55290 AC009090.3-201ENST00000616553 565 ntBASIC3.11□□□□□ -1.91
CDH13P55290 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CDH13P55290 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH13P55290 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH13P55290 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
CDH13P55290 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH13P55290 Z83843.1-201ENST00000604070 3685 ntBASIC3.11□□□□□ -1.91
CDH13P55290 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDH13P55290 AC010680.1-201ENST00000590024 3590 ntBASIC3.1□□□□□ -1.91
CDH13P55290 RNU2-36P-201ENST00000410361 191 ntBASIC3.1□□□□□ -1.91
CDH13P55290 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.1□□□□□ -1.91
CDH13P55290 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH13P55290 AC007919.1-201ENST00000429380 217 ntBASIC3.1□□□□□ -1.91
CDH13P55290 HMGB3P12-201ENST00000438745 556 ntBASIC3.1□□□□□ -1.91
CDH13P55290 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH13P55290 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH13P55290 USP9YP29-201ENST00000445112 563 ntBASIC3.1□□□□□ -1.91
CDH13P55290 AL360221.1-201ENST00000445989 335 ntBASIC3.1□□□□□ -1.91
CDH13P55290 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH13P55290 MTND1P27-201ENST00000451117 902 ntBASIC3.1□□□□□ -1.91
CDH13P55290 SNORA84-201ENST00000459229 133 ntBASIC3.1□□□□□ -1.91
CDH13P55290 RPL21P10-201ENST00000463521 490 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms