Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AP005435.4-201ENST00000529514 284 ntBASIC3.37□□□□□ -1.87
CDH12P55289 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.37□□□□□ -1.87
CDH12P55289 NCAPGP2-201ENST00000557911 754 ntBASIC3.37□□□□□ -1.87
CDH12P55289 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH12P55289 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.37□□□□□ -1.87
CDH12P55289 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.37□□□□□ -1.87
CDH12P55289 AL670379.6-201ENST00000603753 252 ntBASIC3.37□□□□□ -1.87
CDH12P55289 AL670379.11-201ENST00000604059 253 ntBASIC3.37□□□□□ -1.87
CDH12P55289 AC008162.1-201ENST00000604718 254 ntBASIC3.37□□□□□ -1.87
CDH12P55289 AL670379.1-201ENST00000604752 252 ntBASIC3.37□□□□□ -1.87
CDH12P55289 AL670379.5-201ENST00000605253 252 ntBASIC3.37□□□□□ -1.87
CDH12P55289 AL670379.12-201ENST00000605291 253 ntBASIC3.37□□□□□ -1.87
CDH12P55289 AL670379.8-201ENST00000605353 252 ntBASIC3.37□□□□□ -1.87
CDH12P55289 AL670379.7-201ENST00000605823 252 ntBASIC3.37□□□□□ -1.87
CDH12P55289 AC008945.2-201ENST00000606056 604 ntBASIC3.37□□□□□ -1.87
CDH12P55289 RMST_8.1-201ENST00000610287 165 ntBASIC3.37□□□□□ -1.87
CDH12P55289 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
CDH12P55289 SDR42E1P2-201ENST00000614861 481 ntBASIC3.37□□□□□ -1.87
CDH12P55289 AC010133.1-201ENST00000615809 842 ntBASIC3.37□□□□□ -1.87
CDH12P55289 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH12P55289 AC010338.1-201ENST00000621823 717 ntBASIC3.37□□□□□ -1.87
CDH12P55289 AL354798.1-201ENST00000622505 329 ntBASIC3.37□□□□□ -1.87
CDH12P55289 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.37□□□□□ -1.87
CDH12P55289 MIR4275-201ENST00000636486 87 ntBASIC3.37□□□□□ -1.87
CDH12P55289 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDH12P55289 AP001350.1-201ENST00000601906 1524 ntBASIC3.37□□□□□ -1.87
CDH12P55289 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH12P55289 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CDH12P55289 PRO1804-201ENST00000623780 2050 ntBASIC3.37□□□□□ -1.87
CDH12P55289 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CDH12P55289 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH12P55289 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH12P55289 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH12P55289 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH12P55289 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH12P55289 SNORA7.2-201ENST00000364446 145 ntBASIC3.36□□□□□ -1.87
CDH12P55289 SNORD6-201ENST00000365444 73 ntBASIC3.36□□□□□ -1.87
CDH12P55289 RNU6-61P-201ENST00000365528 109 ntBASIC3.36□□□□□ -1.87
CDH12P55289 RNU6-946P-201ENST00000383878 107 ntBASIC3.36□□□□□ -1.87
CDH12P55289 UBE2V1P2-201ENST00000397758 440 ntBASIC3.36□□□□□ -1.87
CDH12P55289 PPIAP31-201ENST00000405422 495 ntBASIC3.36□□□□□ -1.87
CDH12P55289 MTHFD2P2-201ENST00000407725 247 ntBASIC3.36□□□□□ -1.87
CDH12P55289 RN7SKP285-201ENST00000410137 318 ntBASIC3.36□□□□□ -1.87
CDH12P55289 RNU6-628P-201ENST00000410675 107 ntBASIC3.36□□□□□ -1.87
CDH12P55289 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH12P55289 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH12P55289 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.36□□□□□ -1.87
CDH12P55289 AL591419.1-201ENST00000427423 339 ntBASIC3.36□□□□□ -1.87
CDH12P55289 RPL36AP6-201ENST00000435770 321 ntBASIC3.36□□□□□ -1.87
CDH12P55289 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH12P55289 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH12P55289 CEACAMP4-201ENST00000457676 421 ntBASIC3.36□□□□□ -1.87
CDH12P55289 AL162395.1-201ENST00000457882 422 ntBASIC3.36□□□□□ -1.87
CDH12P55289 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.36□□□□□ -1.87
CDH12P55289 HSPE1P6-201ENST00000479457 291 ntBASIC3.36□□□□□ -1.87
CDH12P55289 AP001086.1-201ENST00000494882 321 ntBASIC3.36□□□□□ -1.87
CDH12P55289 CEACAMP10-202ENST00000495431 496 ntBASIC3.36□□□□□ -1.87
CDH12P55289 RPL7P47-201ENST00000497299 556 ntBASIC3.36□□□□□ -1.87
CDH12P55289 AC105417.1-201ENST00000514691 285 ntBASIC3.36□□□□□ -1.87
CDH12P55289 RN7SKP219-201ENST00000516825 296 ntBASIC3.36□□□□□ -1.87
CDH12P55289 RNU6-1073P-201ENST00000517182 106 ntBASIC3.36□□□□□ -1.87
CDH12P55289 RNU6-840P-201ENST00000517275 65 ntBASIC3.36□□□□□ -1.87
CDH12P55289 NDUFB9P3-201ENST00000521269 501 ntBASIC3.36□□□□□ -1.87
CDH12P55289 SUB1P1-201ENST00000524415 382 ntBASIC3.36□□□□□ -1.87
CDH12P55289 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH12P55289 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH12P55289 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH12P55289 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH12P55289 PARP1P2-201ENST00000556806 195 ntBASIC3.36□□□□□ -1.87
CDH12P55289 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH12P55289 TGIF1P1-201ENST00000558095 802 ntBASIC3.36□□□□□ -1.87
CDH12P55289 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH12P55289 MED28P6-201ENST00000558776 231 ntBASIC3.36□□□□□ -1.87
CDH12P55289 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH12P55289 AC053481.4-201ENST00000583164 216 ntBASIC3.36□□□□□ -1.87
CDH12P55289 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.36□□□□□ -1.87
CDH12P55289 DPPA3P3-201ENST00000603842 430 ntBASIC3.36□□□□□ -1.87
CDH12P55289 AP001330.4-201ENST00000604350 154 ntBASIC3.36□□□□□ -1.87
CDH12P55289 AC007619.2-201ENST00000605743 379 ntBASIC3.36□□□□□ -1.87
CDH12P55289 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CDH12P55289 AC092794.2-201ENST00000620933 563 ntBASIC3.36□□□□□ -1.87
CDH12P55289 AC011155.2-201ENST00000623202 216 ntBASIC3.36□□□□□ -1.87
CDH12P55289 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.36□□□□□ -1.87
CDH12P55289 AP000553.6-201ENST00000641242 118 ntBASIC3.36□□□□□ -1.87
CDH12P55289 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH12P55289 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CDH12P55289 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.36□□□□□ -1.87
CDH12P55289 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CDH12P55289 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.35□□□□□ -1.87
CDH12P55289 AC004972.1-201ENST00000623934 2209 ntBASIC3.35□□□□□ -1.87
CDH12P55289 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CDH12P55289 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.35□□□□□ -1.87
CDH12P55289 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH12P55289 RNU6-179P-201ENST00000363350 107 ntBASIC3.35□□□□□ -1.87
CDH12P55289 RNU6-173P-201ENST00000364215 104 ntBASIC3.35□□□□□ -1.87
CDH12P55289 SNORA70.2-201ENST00000364506 135 ntBASIC3.35□□□□□ -1.87
CDH12P55289 RNU5E-4P-201ENST00000364931 120 ntBASIC3.35□□□□□ -1.87
CDH12P55289 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDH12P55289 RNU6-1029P-201ENST00000384109 107 ntBASIC3.35□□□□□ -1.87
CDH12P55289 RNU6-1181P-201ENST00000384191 106 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms