Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AL391261.3-201ENST00000557194 520 ntBASIC1.55□□□□□ -2.16
GTF2A1P52655 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.55□□□□□ -2.16
GTF2A1P52655 AC074051.3-201ENST00000570238 358 ntBASIC1.55□□□□□ -2.16
GTF2A1P52655 CBX3P2-202ENST00000583365 535 ntBASIC1.55□□□□□ -2.16
GTF2A1P52655 AC015688.2-201ENST00000584523 262 ntBASIC1.55□□□□□ -2.16
GTF2A1P52655 NRBF2P1-201ENST00000587407 859 ntBASIC1.55□□□□□ -2.16
GTF2A1P52655 AC068313.1-201ENST00000604028 1008 ntBASIC1.55□□□□□ -2.16
GTF2A1P52655 AC013553.2-201ENST00000604244 589 ntBASIC1.55□□□□□ -2.16
GTF2A1P52655 AL391597.1-201ENST00000618707 694 ntBASIC1.55□□□□□ -2.16
GTF2A1P52655 AC009318.4-201ENST00000620496 486 ntBASIC1.55□□□□□ -2.16
GTF2A1P52655 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.55□□□□□ -2.16
GTF2A1P52655 AC092608.3-201ENST00000625017 386 ntBASIC1.55□□□□□ -2.16
GTF2A1P52655 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
GTF2A1P52655 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.55□□□□□ -2.16
GTF2A1P52655 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.54□□□□□ -2.16
GTF2A1P52655 AP000648.3-201ENST00000623539 4507 ntBASIC1.54□□□□□ -2.16
GTF2A1P52655 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.54□□□□□ -2.16
GTF2A1P52655 RNU4-82P-201ENST00000362443 140 ntBASIC1.54□□□□□ -2.16
GTF2A1P52655 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
GTF2A1P52655 AC023141.4-201ENST00000412031 328 ntBASIC1.54□□□□□ -2.16
GTF2A1P52655 RPL23AP39-201ENST00000415533 405 ntBASIC1.54□□□□□ -2.16
GTF2A1P52655 AL135786.1-201ENST00000415892 214 ntBASIC1.54□□□□□ -2.16
GTF2A1P52655 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.54□□□□□ -2.16
GTF2A1P52655 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC1.54□□□□□ -2.16
GTF2A1P52655 RPS3AP44-201ENST00000425466 790 ntBASIC1.54□□□□□ -2.16
GTF2A1P52655 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
GTF2A1P52655 AL645568.3-201ENST00000433683 316 ntBASIC1.54□□□□□ -2.16
GTF2A1P52655 FAM103A2P-201ENST00000444122 354 ntBASIC1.54□□□□□ -2.16
GTF2A1P52655 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.54□□□□□ -2.16
GTF2A1P52655 AL353705.4-201ENST00000449661 238 ntBASIC1.54□□□□□ -2.16
GTF2A1P52655 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.54□□□□□ -2.16
GTF2A1P52655 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
GTF2A1P52655 AC093752.1-206ENST00000511823 336 ntBASIC1.54□□□□□ -2.16
GTF2A1P52655 AC107393.1-201ENST00000512403 346 ntBASIC1.54□□□□□ -2.16
GTF2A1P52655 RNU6-1282P-201ENST00000516735 96 ntBASIC1.54□□□□□ -2.16
GTF2A1P52655 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC1.54□□□□□ -2.16
GTF2A1P52655 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.54□□□□□ -2.16
GTF2A1P52655 LSM6P2-201ENST00000552208 177 ntBASIC1.54□□□□□ -2.16
GTF2A1P52655 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.54□□□□□ -2.16
GTF2A1P52655 MIR3198-2-201ENST00000577868 80 ntBASIC1.54□□□□□ -2.16
GTF2A1P52655 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.54□□□□□ -2.16
GTF2A1P52655 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.54□□□□□ -2.16
GTF2A1P52655 AC016542.1-201ENST00000608259 493 ntBASIC1.54□□□□□ -2.16
GTF2A1P52655 AC090132.2-201ENST00000615881 347 ntBASIC1.54□□□□□ -2.16
GTF2A1P52655 AC098679.5-201ENST00000624394 571 ntBASIC1.54□□□□□ -2.16
GTF2A1P52655 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
GTF2A1P52655 IGHVIII-44-202ENST00000636235 289 ntBASIC1.54□□□□□ -2.16
GTF2A1P52655 LINC02211-204ENST00000642024 1070 ntBASIC1.54□□□□□ -2.16
GTF2A1P52655 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
GTF2A1P52655 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.54□□□□□ -2.16
GTF2A1P52655 RNU6-543P-201ENST00000362576 108 ntBASIC1.53□□□□□ -2.16
GTF2A1P52655 RNU6-152P-201ENST00000384037 107 ntBASIC1.53□□□□□ -2.16
GTF2A1P52655 MIR9-3-201ENST00000385084 90 ntBASIC1.53□□□□□ -2.16
GTF2A1P52655 AL445183.3-201ENST00000414168 502 ntBASIC1.53□□□□□ -2.16
GTF2A1P52655 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.53□□□□□ -2.16
GTF2A1P52655 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC1.53□□□□□ -2.16
GTF2A1P52655 DPH3P2-201ENST00000422618 250 ntBASIC1.53□□□□□ -2.16
GTF2A1P52655 AL049641.1-201ENST00000441055 1948 ntBASIC1.53□□□□□ -2.16
GTF2A1P52655 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.53□□□□□ -2.16
GTF2A1P52655 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.53□□□□□ -2.16
GTF2A1P52655 HMGB1P1-201ENST00000522557 636 ntBASIC1.53□□□□□ -2.16
GTF2A1P52655 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC1.53□□□□□ -2.16
GTF2A1P52655 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.53□□□□□ -2.16
GTF2A1P52655 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
GTF2A1P52655 AC124283.4-201ENST00000581815 456 ntBASIC1.53□□□□□ -2.16
GTF2A1P52655 MIR4672-201ENST00000583126 81 ntBASIC1.53□□□□□ -2.16
GTF2A1P52655 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.53□□□□□ -2.16
GTF2A1P52655 PRR13P7-201ENST00000605538 430 ntBASIC1.53□□□□□ -2.16
GTF2A1P52655 AL136981.2-201ENST00000617319 734 ntBASIC1.53□□□□□ -2.16
GTF2A1P52655 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.53□□□□□ -2.16
GTF2A1P52655 HSPA8P4-201ENST00000511877 1920 ntBASIC1.52□□□□□ -2.17
GTF2A1P52655 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.52□□□□□ -2.17
GTF2A1P52655 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
GTF2A1P52655 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
GTF2A1P52655 RNA5SP88-201ENST00000365560 109 ntBASIC1.52□□□□□ -2.17
GTF2A1P52655 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.52□□□□□ -2.17
GTF2A1P52655 RNU6-1083P-201ENST00000384022 107 ntBASIC1.52□□□□□ -2.17
GTF2A1P52655 SNORA3.2-201ENST00000408221 125 ntBASIC1.52□□□□□ -2.17
GTF2A1P52655 RNA5SP425-201ENST00000410336 112 ntBASIC1.52□□□□□ -2.17
GTF2A1P52655 AL139415.2-201ENST00000431968 163 ntBASIC1.52□□□□□ -2.17
GTF2A1P52655 UBE2D3P1-201ENST00000436669 444 ntBASIC1.52□□□□□ -2.17
GTF2A1P52655 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
GTF2A1P52655 BMI1P1-201ENST00000445879 941 ntBASIC1.52□□□□□ -2.17
GTF2A1P52655 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.52□□□□□ -2.17
GTF2A1P52655 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.52□□□□□ -2.17
GTF2A1P52655 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.52□□□□□ -2.17
GTF2A1P52655 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.52□□□□□ -2.17
GTF2A1P52655 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.52□□□□□ -2.17
GTF2A1P52655 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.52□□□□□ -2.17
GTF2A1P52655 SCARNA3-201ENST00000517097 143 ntBASIC1.52□□□□□ -2.17
GTF2A1P52655 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.52□□□□□ -2.17
GTF2A1P52655 HIGD1AP6-201ENST00000521833 279 ntBASIC1.52□□□□□ -2.17
GTF2A1P52655 AP005597.4-201ENST00000526762 229 ntBASIC1.52□□□□□ -2.17
GTF2A1P52655 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.52□□□□□ -2.17
GTF2A1P52655 TRAV11-201ENST00000539512 339 ntBASIC1.52□□□□□ -2.17
GTF2A1P52655 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.52□□□□□ -2.17
GTF2A1P52655 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.52□□□□□ -2.17
GTF2A1P52655 AC008121.1-201ENST00000603244 268 ntBASIC1.52□□□□□ -2.17
GTF2A1P52655 BNIP3P4-201ENST00000604946 565 ntBASIC1.52□□□□□ -2.17
GTF2A1P52655 AC021851.1-201ENST00000608537 1082 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms