Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
USP11P51784 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.04□□□□□ -1.6
USP11P51784 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP11P51784 Y_RNA.26-201ENST00000362539 101 ntBASIC5.04□□□□□ -1.6
USP11P51784 Y_RNA.39-201ENST00000362620 98 ntBASIC5.04□□□□□ -1.6
USP11P51784 RNA5SP307-201ENST00000362863 116 ntBASIC5.04□□□□□ -1.6
USP11P51784 SNORA23-201ENST00000365128 182 ntBASIC5.04□□□□□ -1.6
USP11P51784 RNU6-715P-201ENST00000365204 103 ntBASIC5.04□□□□□ -1.6
USP11P51784 MIR195-201ENST00000385194 87 ntBASIC5.04□□□□□ -1.6
USP11P51784 U3.22-201ENST00000391120 215 ntBASIC5.04□□□□□ -1.6
USP11P51784 RNU2-38P-201ENST00000410856 79 ntBASIC5.04□□□□□ -1.6
USP11P51784 C4BPAP2-201ENST00000428434 478 ntBASIC5.04□□□□□ -1.6
USP11P51784 PSMA2P3-201ENST00000429685 675 ntBASIC5.04□□□□□ -1.6
USP11P51784 AL158071.1-201ENST00000430315 461 ntBASIC5.04□□□□□ -1.6
USP11P51784 GAPDHP27-201ENST00000447427 1020 ntBASIC5.04□□□□□ -1.6
USP11P51784 EIF4A1P11-201ENST00000451239 222 ntBASIC5.04□□□□□ -1.6
USP11P51784 RPS23P3-201ENST00000470993 430 ntBASIC5.04□□□□□ -1.6
USP11P51784 AC010683.1-201ENST00000473673 378 ntBASIC5.04□□□□□ -1.6
USP11P51784 RN7SL817P-201ENST00000480777 288 ntBASIC5.04□□□□□ -1.6
USP11P51784 RN7SL810P-201ENST00000493031 276 ntBASIC5.04□□□□□ -1.6
USP11P51784 AC026801.1-201ENST00000497178 464 ntBASIC5.04□□□□□ -1.6
USP11P51784 GZMAP1-201ENST00000503054 631 ntBASIC5.04□□□□□ -1.6
USP11P51784 AC022447.4-201ENST00000504053 364 ntBASIC5.04□□□□□ -1.6
USP11P51784 IGKV1OR2-1-201ENST00000514060 354 ntBASIC5.04□□□□□ -1.6
USP11P51784 Y_RNA.715-201ENST00000517082 110 ntBASIC5.04□□□□□ -1.6
USP11P51784 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.04□□□□□ -1.6
USP11P51784 AC026371.1-201ENST00000551867 419 ntBASIC5.04□□□□□ -1.6
USP11P51784 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC5.04□□□□□ -1.6
USP11P51784 RPL21P7-201ENST00000557463 483 ntBASIC5.04□□□□□ -1.6
USP11P51784 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
USP11P51784 ATP5J2P6-201ENST00000565203 266 ntBASIC5.04□□□□□ -1.6
USP11P51784 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.04□□□□□ -1.6
USP11P51784 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.04□□□□□ -1.6
USP11P51784 AC006254.3-201ENST00000603353 884 ntBASIC5.04□□□□□ -1.6
USP11P51784 Z98751.3-201ENST00000604447 521 ntBASIC5.04□□□□□ -1.6
USP11P51784 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
USP11P51784 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.04□□□□□ -1.6
USP11P51784 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
USP11P51784 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
USP11P51784 GABPAP-201ENST00000419271 1356 ntBASIC5.04□□□□□ -1.6
USP11P51784 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
USP11P51784 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
USP11P51784 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.03□□□□□ -1.6
USP11P51784 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP11P51784 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
USP11P51784 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
USP11P51784 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.03□□□□□ -1.6
USP11P51784 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
USP11P51784 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP11P51784 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.03□□□□□ -1.6
USP11P51784 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
USP11P51784 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP11P51784 Y_RNA.214-201ENST00000364201 112 ntBASIC5.03□□□□□ -1.6
USP11P51784 RNU6-432P-201ENST00000384196 109 ntBASIC5.03□□□□□ -1.6
USP11P51784 MIR708-201ENST00000390708 88 ntBASIC5.03□□□□□ -1.6
USP11P51784 SNORA11F-201ENST00000408237 128 ntBASIC5.03□□□□□ -1.6
USP11P51784 SNORA74C-2-201ENST00000411179 201 ntBASIC5.03□□□□□ -1.6
USP11P51784 AC096664.2-201ENST00000411843 406 ntBASIC5.03□□□□□ -1.6
USP11P51784 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.03□□□□□ -1.6
USP11P51784 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC5.03□□□□□ -1.6
USP11P51784 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.03□□□□□ -1.6
USP11P51784 ELOCP20-201ENST00000422460 345 ntBASIC5.03□□□□□ -1.6
USP11P51784 AC016712.1-201ENST00000431088 378 ntBASIC5.03□□□□□ -1.6
USP11P51784 Z95327.1-201ENST00000446082 482 ntBASIC5.03□□□□□ -1.6
USP11P51784 AL590664.1-201ENST00000448065 339 ntBASIC5.03□□□□□ -1.6
USP11P51784 PPIAP3-201ENST00000450588 505 ntBASIC5.03□□□□□ -1.6
USP11P51784 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.03□□□□□ -1.6
USP11P51784 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.03□□□□□ -1.6
USP11P51784 AC134698.5-201ENST00000519444 336 ntBASIC5.03□□□□□ -1.6
USP11P51784 AC090151.1-201ENST00000520784 730 ntBASIC5.03□□□□□ -1.6
USP11P51784 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP11P51784 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.03□□□□□ -1.6
USP11P51784 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC5.03□□□□□ -1.6
USP11P51784 AL138889.2-201ENST00000603883 242 ntBASIC5.03□□□□□ -1.6
USP11P51784 AC010201.1-201ENST00000605051 540 ntBASIC5.03□□□□□ -1.6
USP11P51784 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
USP11P51784 AC091979.2-201ENST00000607514 214 ntBASIC5.03□□□□□ -1.6
USP11P51784 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP11P51784 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP11P51784 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
USP11P51784 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
USP11P51784 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP11P51784 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP11P51784 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
USP11P51784 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.03□□□□□ -1.6
USP11P51784 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.03□□□□□ -1.6
USP11P51784 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP11P51784 AL122126.1-201ENST00000546905 1318 ntBASIC5.02□□□□□ -1.61
USP11P51784 AC026951.1-201ENST00000559530 2459 ntBASIC5.02□□□□□ -1.61
USP11P51784 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.02□□□□□ -1.61
USP11P51784 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP11P51784 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.02□□□□□ -1.61
USP11P51784 XIAPP3-201ENST00000312918 795 ntBASIC5.02□□□□□ -1.61
USP11P51784 Y_RNA.376-201ENST00000365638 108 ntBASIC5.02□□□□□ -1.61
USP11P51784 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP11P51784 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP11P51784 RNU6-713P-201ENST00000384761 107 ntBASIC5.02□□□□□ -1.61
USP11P51784 MIR548M-201ENST00000408260 86 ntBASIC5.02□□□□□ -1.61
USP11P51784 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
USP11P51784 RPL12P34-201ENST00000424532 479 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms