Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 LTV1P1-201ENST00000510683 1237 ntBASIC1.5□□□□□ -2.17
RPL28P46779 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.5□□□□□ -2.17
RPL28P46779 SNORA31.6-201ENST00000516241 130 ntBASIC1.5□□□□□ -2.17
RPL28P46779 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.5□□□□□ -2.17
RPL28P46779 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.5□□□□□ -2.17
RPL28P46779 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.5□□□□□ -2.17
RPL28P46779 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.5□□□□□ -2.17
RPL28P46779 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.5□□□□□ -2.17
RPL28P46779 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.5□□□□□ -2.17
RPL28P46779 AC006023.1-201ENST00000603944 259 ntBASIC1.5□□□□□ -2.17
RPL28P46779 APOOP1-201ENST00000604695 592 ntBASIC1.5□□□□□ -2.17
RPL28P46779 AC069304.2-201ENST00000605154 435 ntBASIC1.5□□□□□ -2.17
RPL28P46779 AL450336.1-201ENST00000605180 586 ntBASIC1.5□□□□□ -2.17
RPL28P46779 AL583856.2-201ENST00000606298 543 ntBASIC1.5□□□□□ -2.17
RPL28P46779 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RPL28P46779 AC078880.5-201ENST00000617845 421 ntBASIC1.5□□□□□ -2.17
RPL28P46779 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.5□□□□□ -2.17
RPL28P46779 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.5□□□□□ -2.17
RPL28P46779 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.5□□□□□ -2.17
RPL28P46779 MIR7157-201ENST00000635801 60 ntBASIC1.5□□□□□ -2.17
RPL28P46779 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
RPL28P46779 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
RPL28P46779 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.49□□□□□ -2.17
RPL28P46779 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.49□□□□□ -2.17
RPL28P46779 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.49□□□□□ -2.17
RPL28P46779 AC010889.1-201ENST00000566193 2666 ntBASIC1.49□□□□□ -2.17
RPL28P46779 RNA5SP68-201ENST00000363885 119 ntBASIC1.49□□□□□ -2.17
RPL28P46779 SNORA16B-201ENST00000364674 135 ntBASIC1.49□□□□□ -2.17
RPL28P46779 RNA5SP138-201ENST00000365098 114 ntBASIC1.49□□□□□ -2.17
RPL28P46779 RNU6-359P-201ENST00000365466 108 ntBASIC1.49□□□□□ -2.17
RPL28P46779 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
RPL28P46779 AL031679.1-201ENST00000400616 525 ntBASIC1.49□□□□□ -2.17
RPL28P46779 AL359511.1-201ENST00000402970 211 ntBASIC1.49□□□□□ -2.17
RPL28P46779 RNU2-40P-201ENST00000410833 196 ntBASIC1.49□□□□□ -2.17
RPL28P46779 RN7SKP140-201ENST00000411196 284 ntBASIC1.49□□□□□ -2.17
RPL28P46779 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.49□□□□□ -2.17
RPL28P46779 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.49□□□□□ -2.17
RPL28P46779 TPMTP2-201ENST00000414372 726 ntBASIC1.49□□□□□ -2.17
RPL28P46779 NPM1P11-201ENST00000417106 855 ntBASIC1.49□□□□□ -2.17
RPL28P46779 CYCSP48-201ENST00000417124 323 ntBASIC1.49□□□□□ -2.17
RPL28P46779 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.49□□□□□ -2.17
RPL28P46779 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.49□□□□□ -2.17
RPL28P46779 UBE2D3P3-201ENST00000426992 425 ntBASIC1.49□□□□□ -2.17
RPL28P46779 MTCO1P3-201ENST00000429327 192 ntBASIC1.49□□□□□ -2.17
RPL28P46779 MED14P1-201ENST00000430517 648 ntBASIC1.49□□□□□ -2.17
RPL28P46779 RPL17P35-201ENST00000432217 549 ntBASIC1.49□□□□□ -2.17
RPL28P46779 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.49□□□□□ -2.17
RPL28P46779 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.49□□□□□ -2.17
RPL28P46779 MTND2P20-201ENST00000440805 661 ntBASIC1.49□□□□□ -2.17
RPL28P46779 AC079776.3-201ENST00000450665 370 ntBASIC1.49□□□□□ -2.17
RPL28P46779 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.49□□□□□ -2.17
RPL28P46779 AL109933.2-201ENST00000452651 260 ntBASIC1.49□□□□□ -2.17
RPL28P46779 AC025033.1-201ENST00000463883 194 ntBASIC1.49□□□□□ -2.17
RPL28P46779 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.49□□□□□ -2.17
RPL28P46779 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.49□□□□□ -2.17
RPL28P46779 RNA5SP320-201ENST00000516263 124 ntBASIC1.49□□□□□ -2.17
RPL28P46779 RNU7-193P-201ENST00000516723 65 ntBASIC1.49□□□□□ -2.17
RPL28P46779 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.49□□□□□ -2.17
RPL28P46779 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.49□□□□□ -2.17
RPL28P46779 AP001646.1-201ENST00000527936 915 ntBASIC1.49□□□□□ -2.17
RPL28P46779 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.49□□□□□ -2.17
RPL28P46779 AC021269.2-201ENST00000532318 330 ntBASIC1.49□□□□□ -2.17
RPL28P46779 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.49□□□□□ -2.17
RPL28P46779 HIGD1AP17-201ENST00000554576 276 ntBASIC1.49□□□□□ -2.17
RPL28P46779 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.49□□□□□ -2.17
RPL28P46779 MIR3199-1-201ENST00000582434 88 ntBASIC1.49□□□□□ -2.17
RPL28P46779 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.49□□□□□ -2.17
RPL28P46779 AC002984.1-201ENST00000591692 448 ntBASIC1.49□□□□□ -2.17
RPL28P46779 AC120053.1-201ENST00000607706 736 ntBASIC1.49□□□□□ -2.17
RPL28P46779 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
RPL28P46779 AC098657.3-201ENST00000620434 263 ntBASIC1.49□□□□□ -2.17
RPL28P46779 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.49□□□□□ -2.17
RPL28P46779 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.49□□□□□ -2.17
RPL28P46779 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.49□□□□□ -2.17
RPL28P46779 MIR1291-201ENST00000627649 87 ntBASIC1.49□□□□□ -2.17
RPL28P46779 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.49□□□□□ -2.17
RPL28P46779 AC110491.1-201ENST00000562191 2010 ntBASIC1.49□□□□□ -2.17
RPL28P46779 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.49□□□□□ -2.17
RPL28P46779 AC069528.2-201ENST00000624849 1991 ntBASIC1.48□□□□□ -2.17
RPL28P46779 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.48□□□□□ -2.17
RPL28P46779 AL138713.1-201ENST00000624026 2130 ntBASIC1.48□□□□□ -2.17
RPL28P46779 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.48□□□□□ -2.17
RPL28P46779 SNORA23-201ENST00000365128 182 ntBASIC1.48□□□□□ -2.17
RPL28P46779 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
RPL28P46779 OR5H15-201ENST00000383696 930 ntBASIC1.48□□□□□ -2.17
RPL28P46779 RNU1-39P-201ENST00000383897 165 ntBASIC1.48□□□□□ -2.17
RPL28P46779 RNU6-637P-201ENST00000384050 107 ntBASIC1.48□□□□□ -2.17
RPL28P46779 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
RPL28P46779 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.48□□□□□ -2.17
RPL28P46779 AL079342.2-201ENST00000403367 482 ntBASIC1.48□□□□□ -2.17
RPL28P46779 RNA5SP338-201ENST00000410495 85 ntBASIC1.48□□□□□ -2.17
RPL28P46779 USP9YP19-201ENST00000412165 485 ntBASIC1.48□□□□□ -2.17
RPL28P46779 USP9YP13-201ENST00000417797 480 ntBASIC1.48□□□□□ -2.17
RPL28P46779 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.48□□□□□ -2.17
RPL28P46779 AL451054.2-201ENST00000420896 202 ntBASIC1.48□□□□□ -2.17
RPL28P46779 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.48□□□□□ -2.17
RPL28P46779 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.48□□□□□ -2.17
RPL28P46779 SDR42E1P3-201ENST00000438345 502 ntBASIC1.48□□□□□ -2.17
RPL28P46779 AC098831.1-201ENST00000440661 216 ntBASIC1.48□□□□□ -2.17
RPL28P46779 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms