Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CTNNA1P35221 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.05□□□□□ -1.92
CTNNA1P35221 AC008885.1-201ENST00000514930 301 ntBASIC3.05□□□□□ -1.92
CTNNA1P35221 RNA5SP471-201ENST00000516971 106 ntBASIC3.05□□□□□ -1.92
CTNNA1P35221 RN7SKP272-201ENST00000516988 232 ntBASIC3.05□□□□□ -1.92
CTNNA1P35221 RNA5SP165-201ENST00000517142 115 ntBASIC3.05□□□□□ -1.92
CTNNA1P35221 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.05□□□□□ -1.92
CTNNA1P35221 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.05□□□□□ -1.92
CTNNA1P35221 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.05□□□□□ -1.92
CTNNA1P35221 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.05□□□□□ -1.92
CTNNA1P35221 MTCO3P13-201ENST00000577757 781 ntBASIC3.05□□□□□ -1.92
CTNNA1P35221 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.05□□□□□ -1.92
CTNNA1P35221 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.05□□□□□ -1.92
CTNNA1P35221 MIR3117-201ENST00000584034 78 ntBASIC3.05□□□□□ -1.92
CTNNA1P35221 MIR4293-201ENST00000584305 78 ntBASIC3.05□□□□□ -1.92
CTNNA1P35221 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.05□□□□□ -1.92
CTNNA1P35221 AC061975.8-201ENST00000587058 721 ntBASIC3.05□□□□□ -1.92
CTNNA1P35221 AC006539.2-201ENST00000601729 572 ntBASIC3.05□□□□□ -1.92
CTNNA1P35221 AC105148.1-201ENST00000604961 409 ntBASIC3.05□□□□□ -1.92
CTNNA1P35221 AC144521.1-201ENST00000607148 956 ntBASIC3.05□□□□□ -1.92
CTNNA1P35221 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.05□□□□□ -1.92
CTNNA1P35221 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CTNNA1P35221 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CTNNA1P35221 AC091953.5-201ENST00000622919 233 ntBASIC3.05□□□□□ -1.92
CTNNA1P35221 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CTNNA1P35221 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
CTNNA1P35221 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
CTNNA1P35221 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CTNNA1P35221 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CTNNA1P35221 RNU6-1284P-201ENST00000363701 100 ntBASIC3.04□□□□□ -1.92
CTNNA1P35221 Y_RNA.302-201ENST00000364997 102 ntBASIC3.04□□□□□ -1.92
CTNNA1P35221 SNORA9.2-201ENST00000365361 133 ntBASIC3.04□□□□□ -1.92
CTNNA1P35221 RNU1-73P-201ENST00000383971 164 ntBASIC3.04□□□□□ -1.92
CTNNA1P35221 MIR181A2-201ENST00000384863 110 ntBASIC3.04□□□□□ -1.92
CTNNA1P35221 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.04□□□□□ -1.92
CTNNA1P35221 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.04□□□□□ -1.92
CTNNA1P35221 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.04□□□□□ -1.92
CTNNA1P35221 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC3.04□□□□□ -1.92
CTNNA1P35221 NANOGNBP1-201ENST00000448444 480 ntBASIC3.04□□□□□ -1.92
CTNNA1P35221 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.04□□□□□ -1.92
CTNNA1P35221 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.04□□□□□ -1.92
CTNNA1P35221 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.04□□□□□ -1.92
CTNNA1P35221 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.04□□□□□ -1.92
CTNNA1P35221 RPS27AP9-201ENST00000477681 438 ntBASIC3.04□□□□□ -1.92
CTNNA1P35221 OR2A20P-203ENST00000498397 1268 ntBASIC3.04□□□□□ -1.92
CTNNA1P35221 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CTNNA1P35221 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.04□□□□□ -1.92
CTNNA1P35221 AC098591.2-201ENST00000510152 315 ntBASIC3.04□□□□□ -1.92
CTNNA1P35221 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.04□□□□□ -1.92
CTNNA1P35221 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.04□□□□□ -1.92
CTNNA1P35221 SCARNA11.3-201ENST00000517276 130 ntBASIC3.04□□□□□ -1.92
CTNNA1P35221 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.04□□□□□ -1.92
CTNNA1P35221 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.04□□□□□ -1.92
CTNNA1P35221 AC135507.1-201ENST00000607214 561 ntBASIC3.04□□□□□ -1.92
CTNNA1P35221 TUSC7.1-201ENST00000610969 165 ntBASIC3.04□□□□□ -1.92
CTNNA1P35221 AC140725.3-201ENST00000616193 880 ntBASIC3.04□□□□□ -1.92
CTNNA1P35221 AL355493.4-201ENST00000618530 292 ntBASIC3.04□□□□□ -1.92
CTNNA1P35221 AL391262.2-201ENST00000622466 494 ntBASIC3.04□□□□□ -1.92
CTNNA1P35221 U2.21-201ENST00000637295 81 ntBASIC3.04□□□□□ -1.92
CTNNA1P35221 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.04□□□□□ -1.92
CTNNA1P35221 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
CTNNA1P35221 ELF2P3-201ENST00000445099 1506 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 AC135776.4-201ENST00000624300 1904 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 Y_RNA.18-201ENST00000362461 102 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.03□□□□□ -1.92
CTNNA1P35221 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.03□□□□□ -1.92
CTNNA1P35221 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.03□□□□□ -1.92
CTNNA1P35221 RPS3AP25-201ENST00000411660 793 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.03□□□□□ -1.92
CTNNA1P35221 SKA2P1-201ENST00000425592 390 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 HMGB1P27-201ENST00000431429 603 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 GPM6BP2-201ENST00000432046 144 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 RPL36AP53-201ENST00000432891 316 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.03□□□□□ -1.92
CTNNA1P35221 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.03□□□□□ -1.92
CTNNA1P35221 AL445687.1-201ENST00000439946 251 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 AC098831.1-201ENST00000440661 216 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.03□□□□□ -1.92
CTNNA1P35221 AL831737.1-201ENST00000441288 271 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.03□□□□□ -1.92
CTNNA1P35221 RPL39P40-201ENST00000445481 146 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 GPM6BP1-201ENST00000446387 144 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.03□□□□□ -1.92
CTNNA1P35221 VN1R34P-201ENST00000447387 883 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.03□□□□□ -1.92
CTNNA1P35221 RPS3AP43-201ENST00000479743 781 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 RPL9P33-201ENST00000484311 566 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 EIF4EP3-201ENST00000498782 656 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 RNU5F-8P-201ENST00000515941 111 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 SNORA31.18-201ENST00000517043 134 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.03□□□□□ -1.92
CTNNA1P35221 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.03□□□□□ -1.92
CTNNA1P35221 AC023050.2-201ENST00000544968 387 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 MIR1254-2-201ENST00000579553 63 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 BNIP3P40-201ENST00000596017 556 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 AC011458.1-201ENST00000604034 617 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 AC012468.1-201ENST00000604888 430 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 AC107294.1-201ENST00000609524 467 ntBASIC3.03□□□□□ -1.92
CTNNA1P35221 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms