Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 AL096829.2-201ENST00000446582 742 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 AC009474.2-201ENST00000451383 136 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 FCF1P6-201ENST00000456841 595 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.86□□□□□ -2.11
COL5A3P25940 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.86□□□□□ -2.11
COL5A3P25940 AP003066.2-201ENST00000529375 555 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.86□□□□□ -2.11
COL5A3P25940 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.86□□□□□ -2.11
COL5A3P25940 AC008507.2-201ENST00000588402 1176 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.86□□□□□ -2.11
COL5A3P25940 AC092953.2-201ENST00000608000 699 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.86□□□□□ -2.11
COL5A3P25940 AC008759.3-201ENST00000613300 508 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 U73479.1-201ENST00000618062 168 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.86□□□□□ -2.11
COL5A3P25940 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC1.86□□□□□ -2.11
COL5A3P25940 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
COL5A3P25940 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.86□□□□□ -2.11
COL5A3P25940 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL5A3P25940 SEC63P2-201ENST00000503863 1939 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 RNU6-543P-201ENST00000362576 108 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 RNU6-629P-201ENST00000384061 103 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 RNU6-207P-201ENST00000384137 107 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 RNU6-1000P-201ENST00000391066 106 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 SNORA67.6-201ENST00000391093 99 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 PRRC2CP1-201ENST00000404428 159 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 SUMO2P12-201ENST00000405924 140 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL5A3P25940 NUP35P2-201ENST00000416748 943 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 AC093422.3-201ENST00000428506 305 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 HSFY7P-201ENST00000432672 318 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 CKS1BP5-201ENST00000434172 273 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 HSFY8P-201ENST00000437934 318 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 FABP5P3-201ENST00000437960 408 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.86□□□□□ -2.11
COL5A3P25940 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.86□□□□□ -2.11
COL5A3P25940 HSFY5P-201ENST00000453726 309 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.86□□□□□ -2.11
COL5A3P25940 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.86□□□□□ -2.11
COL5A3P25940 SUMO2P5-201ENST00000506790 245 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC1.86□□□□□ -2.11
COL5A3P25940 AC021146.8-201ENST00000507455 733 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.86□□□□□ -2.11
COL5A3P25940 MTCO3P44-201ENST00000510977 541 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.86□□□□□ -2.11
COL5A3P25940 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.86□□□□□ -2.11
COL5A3P25940 BNIP3P27-201ENST00000599991 412 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 AC009220.3-201ENST00000604318 586 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 AC140725.3-201ENST00000616193 880 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 AL049777.1-201ENST00000622740 518 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 AC126544.2-201ENST00000625174 749 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 MIR6767-201ENST00000637302 66 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 AC017104.5-201ENST00000637647 639 ntBASIC1.86□□□□□ -2.11
COL5A3P25940 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.85□□□□□ -2.11
COL5A3P25940 AC093536.2-201ENST00000565257 1406 ntBASIC1.85□□□□□ -2.11
COL5A3P25940 AC011477.1-204ENST00000623416 1325 ntBASIC1.85□□□□□ -2.11
COL5A3P25940 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL5A3P25940 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL5A3P25940 SNORD65C-201ENST00000390962 71 ntBASIC1.85□□□□□ -2.11
COL5A3P25940 AL136133.1-201ENST00000413694 376 ntBASIC1.85□□□□□ -2.11
COL5A3P25940 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.85□□□□□ -2.11
COL5A3P25940 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.85□□□□□ -2.11
COL5A3P25940 AL365400.1-201ENST00000431854 640 ntBASIC1.85□□□□□ -2.11
COL5A3P25940 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.85□□□□□ -2.11
COL5A3P25940 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.85□□□□□ -2.11
COL5A3P25940 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.85□□□□□ -2.11
COL5A3P25940 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC1.85□□□□□ -2.11
COL5A3P25940 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC1.85□□□□□ -2.11
COL5A3P25940 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC1.85□□□□□ -2.11
COL5A3P25940 RNF138P1-201ENST00000502765 546 ntBASIC1.85□□□□□ -2.11
COL5A3P25940 AC093801.2-201ENST00000503966 1050 ntBASIC1.85□□□□□ -2.11
COL5A3P25940 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.85□□□□□ -2.11
COL5A3P25940 AC109635.4-202ENST00000531666 412 ntBASIC1.85□□□□□ -2.11
COL5A3P25940 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.85□□□□□ -2.11
COL5A3P25940 AL391262.2-201ENST00000622466 494 ntBASIC1.85□□□□□ -2.11
COL5A3P25940 AL138955.1-201ENST00000622881 1040 ntBASIC1.85□□□□□ -2.11
COL5A3P25940 AC093875.1-201ENST00000623688 504 ntBASIC1.85□□□□□ -2.11
COL5A3P25940 PABPC1P7-201ENST00000413177 1513 ntBASIC1.85□□□□□ -2.11
COL5A3P25940 RNU5B-4P-201ENST00000363508 111 ntBASIC1.84□□□□□ -2.11
COL5A3P25940 RNU6-1293P-201ENST00000384077 107 ntBASIC1.84□□□□□ -2.11
COL5A3P25940 SNORA51.12-201ENST00000384448 134 ntBASIC1.84□□□□□ -2.11
COL5A3P25940 RPL22P22-201ENST00000395439 379 ntBASIC1.84□□□□□ -2.11
COL5A3P25940 RNU6-272P-201ENST00000411028 104 ntBASIC1.84□□□□□ -2.11
COL5A3P25940 AC002542.1-201ENST00000440683 193 ntBASIC1.84□□□□□ -2.11
COL5A3P25940 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.84□□□□□ -2.11
COL5A3P25940 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.84□□□□□ -2.11
COL5A3P25940 AC112198.4-201ENST00000515450 351 ntBASIC1.84□□□□□ -2.11
COL5A3P25940 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.84□□□□□ -2.11
COL5A3P25940 AC007115.1-201ENST00000546853 234 ntBASIC1.84□□□□□ -2.11
COL5A3P25940 AC090666.1-201ENST00000578241 445 ntBASIC1.84□□□□□ -2.11
COL5A3P25940 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.84□□□□□ -2.11
COL5A3P25940 AL606834.3-201ENST00000602615 496 ntBASIC1.84□□□□□ -2.11
COL5A3P25940 AL158050.2-201ENST00000605336 568 ntBASIC1.84□□□□□ -2.11
COL5A3P25940 AC068944.2-201ENST00000610373 403 ntBASIC1.84□□□□□ -2.11
COL5A3P25940 FRG1HP-204ENST00000617940 757 ntBASIC1.84□□□□□ -2.11
COL5A3P25940 AL512427.1-201ENST00000618593 349 ntBASIC1.84□□□□□ -2.11
COL5A3P25940 RNU6-156P-201ENST00000621869 107 ntBASIC1.84□□□□□ -2.11
COL5A3P25940 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.84□□□□□ -2.11
COL5A3P25940 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.84□□□□□ -2.11
COL5A3P25940 AL590396.4-201ENST00000636779 956 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms