Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC6P09630 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
HOXC6P09630 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC6P09630 AC066616.2-201ENST00000559334 1481 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
HOXC6P09630 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC6P09630 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC6P09630 AL161781.1-201ENST00000354277 403 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 Y_RNA.38-201ENST00000362617 102 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 Y_RNA.89-201ENST00000363031 102 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 Y_RNA.159-201ENST00000363674 87 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 RNU6-534P-201ENST00000364877 106 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC6P09630 SNORA54-201ENST00000384281 123 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 MT-TL1-201ENST00000386347 75 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 MRPL42P2-201ENST00000403169 426 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 AC004987.3-201ENST00000413879 771 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 AC127526.1-201ENST00000417526 366 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 USP9YP27-201ENST00000418455 438 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 AL353777.1-201ENST00000425552 326 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 RPL23AP82-202ENST00000427528 469 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXC6P09630 TIMM9P3-201ENST00000428659 274 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 SDCBPP1-201ENST00000440192 890 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 MTND4P25-201ENST00000441039 533 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXC6P09630 MTND5P20-201ENST00000448677 143 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 MTND1P12-201ENST00000455231 147 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 CENPBD1P1-201ENST00000464061 469 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 RN7SL429P-201ENST00000479090 223 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 AC021205.2-201ENST00000480069 347 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 RN7SL489P-201ENST00000486185 223 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 RN7SL327P-201ENST00000488659 223 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 AC010587.1-201ENST00000505809 469 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 AC117522.1-201ENST00000509821 380 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXC6P09630 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.62□□□□□ -1.83
HOXC6P09630 AC114781.4-201ENST00000513707 639 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXC6P09630 RNA5SP309-201ENST00000516670 106 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 IGKV2D-23-201ENST00000518179 286 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXC6P09630 AC025678.1-201ENST00000567861 338 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.62□□□□□ -1.83
HOXC6P09630 AC110741.2-201ENST00000605278 268 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 RN7SL853P-201ENST00000617250 223 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HOXC6P09630 AC012150.2-201ENST00000621300 544 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 AC139792.3-201ENST00000623525 224 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 AC079597.1-201ENST00000624306 508 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HOXC6P09630 AC011978.2-201ENST00000569835 2054 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC6P09630 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
HOXC6P09630 SAGE4P-201ENST00000442271 3381 ntBASIC3.62□□□□□ -1.83
HOXC6P09630 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC6P09630 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC6P09630 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXC6P09630 MTND5P33-201ENST00000571250 1450 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 AL021368.2-201ENST00000606125 5352 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 OR1S2-201ENST00000302592 978 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 RNU6-1085P-201ENST00000363576 107 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 RNY4P16-201ENST00000364768 94 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 AC068050.1-201ENST00000394891 380 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 RPL23AP32-201ENST00000395315 459 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 BTBD10P2-201ENST00000404779 676 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC6P09630 RPL30P2-201ENST00000414021 291 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 RPS15AP40-201ENST00000419621 391 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 AC092832.1-201ENST00000422934 400 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 ZNF863P-201ENST00000426746 417 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 AC133104.1-201ENST00000429100 218 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC6P09630 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC6P09630 RPL7P52-201ENST00000449200 742 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 MRPS31P2-201ENST00000451581 518 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXC6P09630 RPL37P6-202ENST00000464216 403 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC6P09630 AC008628.2-201ENST00000502605 298 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 Y_RNA.693-201ENST00000516641 110 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 Vault.3-201ENST00000516676 95 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 Y_RNA.702-201ENST00000516843 96 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC6P09630 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC6P09630 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC6P09630 AC091135.1-201ENST00000585943 307 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 AC009994.1-201ENST00000606889 253 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 AC008536.2-201ENST00000607284 349 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 BX664608.1-201ENST00000610519 487 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
HOXC6P09630 AC104985.2-201ENST00000620598 500 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC6P09630 MIR1321-201ENST00000637766 79 ntBASIC3.61□□□□□ -1.83
HOXC6P09630 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC6P09630 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXC6P09630 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXC6P09630 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC6P09630 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
HOXC6P09630 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms