Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AC243312.2-201ENST00000623340 601 ntBASIC3.92□□□□□ -1.78
RHOP08100 AL136313.1-201ENST00000624804 202 ntBASIC3.92□□□□□ -1.78
RHOP08100 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.91□□□□□ -1.78
RHOP08100 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RHOP08100 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
RHOP08100 MTCO1P9-201ENST00000505577 1534 ntBASIC3.91□□□□□ -1.78
RHOP08100 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.91□□□□□ -1.78
RHOP08100 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
RHOP08100 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RHOP08100 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
RHOP08100 RNU6-552P-201ENST00000362869 119 ntBASIC3.91□□□□□ -1.78
RHOP08100 RNU6-1284P-201ENST00000363701 100 ntBASIC3.91□□□□□ -1.78
RHOP08100 RNU4-20P-201ENST00000365601 151 ntBASIC3.91□□□□□ -1.78
RHOP08100 RHOT1P2-201ENST00000366423 333 ntBASIC3.91□□□□□ -1.78
RHOP08100 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RHOP08100 RNU6-641P-201ENST00000384006 107 ntBASIC3.91□□□□□ -1.78
RHOP08100 RNVU1-14-201ENST00000384770 164 ntBASIC3.91□□□□□ -1.78
RHOP08100 MIR491-201ENST00000384877 84 ntBASIC3.91□□□□□ -1.78
RHOP08100 MIR483-201ENST00000385070 76 ntBASIC3.91□□□□□ -1.78
RHOP08100 RNU6-510P-201ENST00000391239 108 ntBASIC3.91□□□□□ -1.78
RHOP08100 RNU2-36P-201ENST00000410361 191 ntBASIC3.91□□□□□ -1.78
RHOP08100 RNU2-29P-201ENST00000410423 189 ntBASIC3.91□□□□□ -1.78
RHOP08100 RNU4-65P-201ENST00000410473 140 ntBASIC3.91□□□□□ -1.78
RHOP08100 RNU6-1148P-201ENST00000410992 104 ntBASIC3.91□□□□□ -1.78
RHOP08100 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.91□□□□□ -1.78
RHOP08100 EEF1A1P40-201ENST00000412883 573 ntBASIC3.91□□□□□ -1.78
RHOP08100 AC092447.6-201ENST00000414578 210 ntBASIC3.91□□□□□ -1.78
RHOP08100 NCOR1P3-201ENST00000420479 303 ntBASIC3.91□□□□□ -1.78
RHOP08100 AL645937.1-202ENST00000421799 937 ntBASIC3.91□□□□□ -1.78
RHOP08100 AL391219.1-201ENST00000422570 483 ntBASIC3.91□□□□□ -1.78
RHOP08100 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.91□□□□□ -1.78
RHOP08100 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.91□□□□□ -1.78
RHOP08100 ERLEC1P1-201ENST00000433806 578 ntBASIC3.91□□□□□ -1.78
RHOP08100 KCTD9P3-201ENST00000434597 1169 ntBASIC3.91□□□□□ -1.78
RHOP08100 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.91□□□□□ -1.78
RHOP08100 SNORA71B-202ENST00000439232 272 ntBASIC3.91□□□□□ -1.78
RHOP08100 RPL21P23-201ENST00000446654 460 ntBASIC3.91□□□□□ -1.78
RHOP08100 CYCSP35-201ENST00000451978 304 ntBASIC3.91□□□□□ -1.78
RHOP08100 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RHOP08100 SNORD97-201ENST00000459187 142 ntBASIC3.91□□□□□ -1.78
RHOP08100 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.91□□□□□ -1.78
RHOP08100 AC091885.1-201ENST00000506658 268 ntBASIC3.91□□□□□ -1.78
RHOP08100 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.91□□□□□ -1.78
RHOP08100 Y_RNA.675-201ENST00000516389 149 ntBASIC3.91□□□□□ -1.78
RHOP08100 IGKV2-23-201ENST00000518729 323 ntBASIC3.91□□□□□ -1.78
RHOP08100 HMGN1P28-201ENST00000521340 364 ntBASIC3.91□□□□□ -1.78
RHOP08100 AC107953.1-201ENST00000522216 297 ntBASIC3.91□□□□□ -1.78
RHOP08100 FAM60DP-201ENST00000524174 632 ntBASIC3.91□□□□□ -1.78
RHOP08100 AC022690.1-201ENST00000526681 550 ntBASIC3.91□□□□□ -1.78
RHOP08100 AC103843.2-201ENST00000530523 682 ntBASIC3.91□□□□□ -1.78
RHOP08100 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.91□□□□□ -1.78
RHOP08100 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.91□□□□□ -1.78
RHOP08100 AC078814.3-201ENST00000553036 491 ntBASIC3.91□□□□□ -1.78
RHOP08100 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.91□□□□□ -1.78
RHOP08100 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RHOP08100 MIR4795-201ENST00000584182 89 ntBASIC3.91□□□□□ -1.78
RHOP08100 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.91□□□□□ -1.78
RHOP08100 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.91□□□□□ -1.78
RHOP08100 AC012443.1-201ENST00000605605 231 ntBASIC3.91□□□□□ -1.78
RHOP08100 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.91□□□□□ -1.78
RHOP08100 C2orf27A-204ENST00000623058 969 ntBASIC3.91□□□□□ -1.78
RHOP08100 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.91□□□□□ -1.78
RHOP08100 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.91□□□□□ -1.78
RHOP08100 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RHOP08100 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RHOP08100 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.91□□□□□ -1.78
RHOP08100 AC073346.2-201ENST00000624724 2058 ntBASIC3.91□□□□□ -1.78
RHOP08100 MFSD8-236ENST00000641509 4050 ntBASIC3.91□□□□□ -1.78
RHOP08100 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RHOP08100 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
RHOP08100 BDP1P-201ENST00000582658 1990 ntBASIC3.91□□□□□ -1.78
RHOP08100 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
RHOP08100 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
RHOP08100 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
RHOP08100 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.9□□□□□ -1.78
RHOP08100 AC090337.1-201ENST00000579651 2074 ntBASIC3.9□□□□□ -1.78
RHOP08100 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
RHOP08100 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC3.9□□□□□ -1.78
RHOP08100 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
RHOP08100 SNORA62.1-201ENST00000364287 154 ntBASIC3.9□□□□□ -1.79
RHOP08100 RNU6-903P-201ENST00000391270 109 ntBASIC3.9□□□□□ -1.79
RHOP08100 BEND7P1-201ENST00000422058 457 ntBASIC3.9□□□□□ -1.79
RHOP08100 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.9□□□□□ -1.79
RHOP08100 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.9□□□□□ -1.79
RHOP08100 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.9□□□□□ -1.79
RHOP08100 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.9□□□□□ -1.79
RHOP08100 MTND3P16-201ENST00000452205 344 ntBASIC3.9□□□□□ -1.79
RHOP08100 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.9□□□□□ -1.79
RHOP08100 RPS29P15-201ENST00000458329 171 ntBASIC3.9□□□□□ -1.79
RHOP08100 SNORD105B-201ENST00000458770 79 ntBASIC3.9□□□□□ -1.79
RHOP08100 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.9□□□□□ -1.79
RHOP08100 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.9□□□□□ -1.79
RHOP08100 RPL31P61-201ENST00000496160 376 ntBASIC3.9□□□□□ -1.79
RHOP08100 AC092436.1-201ENST00000506450 503 ntBASIC3.9□□□□□ -1.79
RHOP08100 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.9□□□□□ -1.79
RHOP08100 SNORA70.24-201ENST00000517233 118 ntBASIC3.9□□□□□ -1.79
RHOP08100 AC103783.1-201ENST00000520506 373 ntBASIC3.9□□□□□ -1.79
RHOP08100 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.9□□□□□ -1.79
RHOP08100 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.9□□□□□ -1.79
RHOP08100 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms