Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ZNF271P-202ENST00000465539 1970 ntBASIC2.58□□□□□ -2
CAPN1P07384 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CAPN1P07384 RNU4-82P-201ENST00000362443 140 ntBASIC2.57□□□□□ -2
CAPN1P07384 RNU6-859P-201ENST00000362728 107 ntBASIC2.57□□□□□ -2
CAPN1P07384 U3.12-201ENST00000364498 214 ntBASIC2.57□□□□□ -2
CAPN1P07384 MIR620-201ENST00000385232 95 ntBASIC2.57□□□□□ -2
CAPN1P07384 ERHP2-201ENST00000402323 299 ntBASIC2.57□□□□□ -2
CAPN1P07384 AL356057.3-201ENST00000402607 340 ntBASIC2.57□□□□□ -2
CAPN1P07384 RNU2-33P-201ENST00000410344 192 ntBASIC2.57□□□□□ -2
CAPN1P07384 RNU4-22P-201ENST00000411058 166 ntBASIC2.57□□□□□ -2
CAPN1P07384 HMGB1P49-201ENST00000418882 569 ntBASIC2.57□□□□□ -2
CAPN1P07384 AC083875.1-201ENST00000419509 405 ntBASIC2.57□□□□□ -2
CAPN1P07384 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.57□□□□□ -2
CAPN1P07384 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.57□□□□□ -2
CAPN1P07384 USP9YP10-201ENST00000454868 628 ntBASIC2.57□□□□□ -2
CAPN1P07384 snoU109.3-201ENST00000459477 145 ntBASIC2.57□□□□□ -2
CAPN1P07384 RPL37P6-201ENST00000460682 294 ntBASIC2.57□□□□□ -2
CAPN1P07384 AL160314.1-201ENST00000490836 438 ntBASIC2.57□□□□□ -2
CAPN1P07384 AC034222.1-201ENST00000494052 532 ntBASIC2.57□□□□□ -2
CAPN1P07384 AC105252.1-201ENST00000503089 286 ntBASIC2.57□□□□□ -2
CAPN1P07384 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.57□□□□□ -2
CAPN1P07384 RPL37P25-201ENST00000507308 276 ntBASIC2.57□□□□□ -2
CAPN1P07384 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.57□□□□□ -2
CAPN1P07384 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.57□□□□□ -2
CAPN1P07384 MRPS36P2-201ENST00000512569 299 ntBASIC2.57□□□□□ -2
CAPN1P07384 AC110760.3-202ENST00000515177 371 ntBASIC2.57□□□□□ -2
CAPN1P07384 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.57□□□□□ -2
CAPN1P07384 AC100870.1-201ENST00000522035 505 ntBASIC2.57□□□□□ -2
CAPN1P07384 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.57□□□□□ -2
CAPN1P07384 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.57□□□□□ -2
CAPN1P07384 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.57□□□□□ -2
CAPN1P07384 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
CAPN1P07384 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.57□□□□□ -2
CAPN1P07384 BX664608.1-201ENST00000610519 487 ntBASIC2.57□□□□□ -2
CAPN1P07384 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.57□□□□□ -2
CAPN1P07384 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC2.57□□□□□ -2
CAPN1P07384 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
CAPN1P07384 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
CAPN1P07384 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.57□□□□□ -2
CAPN1P07384 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
CAPN1P07384 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
CAPN1P07384 AL359693.1-201ENST00000614959 2407 ntBASIC2.57□□□□□ -2
CAPN1P07384 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.57□□□□□ -2
CAPN1P07384 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CAPN1P07384 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.57□□□□□ -2
CAPN1P07384 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CAPN1P07384 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CAPN1P07384 AC135776.4-201ENST00000624300 1904 ntBASIC2.56□□□□□ -2
CAPN1P07384 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.56□□□□□ -2
CAPN1P07384 FTLP6-201ENST00000355274 422 ntBASIC2.56□□□□□ -2
CAPN1P07384 SNORA25.6-201ENST00000364121 118 ntBASIC2.56□□□□□ -2
CAPN1P07384 RNU6-853P-201ENST00000364306 107 ntBASIC2.56□□□□□ -2
CAPN1P07384 RNU6-621P-201ENST00000364752 109 ntBASIC2.56□□□□□ -2
CAPN1P07384 RNU1-39P-201ENST00000383897 165 ntBASIC2.56□□□□□ -2
CAPN1P07384 RNU6-301P-201ENST00000384277 107 ntBASIC2.56□□□□□ -2
CAPN1P07384 MIR196B-201ENST00000384852 84 ntBASIC2.56□□□□□ -2
CAPN1P07384 RNA5SP210-201ENST00000391034 120 ntBASIC2.56□□□□□ -2
CAPN1P07384 AL109755.1-201ENST00000401791 649 ntBASIC2.56□□□□□ -2
CAPN1P07384 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.56□□□□□ -2
CAPN1P07384 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.56□□□□□ -2
CAPN1P07384 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC2.56□□□□□ -2
CAPN1P07384 ARL5AP4-201ENST00000430731 512 ntBASIC2.56□□□□□ -2
CAPN1P07384 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC2.56□□□□□ -2
CAPN1P07384 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.56□□□□□ -2
CAPN1P07384 EXOSC3P1-201ENST00000448649 500 ntBASIC2.56□□□□□ -2
CAPN1P07384 RPL21P134-201ENST00000453468 483 ntBASIC2.56□□□□□ -2
CAPN1P07384 CACYBPP2-201ENST00000453625 678 ntBASIC2.56□□□□□ -2
CAPN1P07384 RPS3P1-201ENST00000456781 192 ntBASIC2.56□□□□□ -2
CAPN1P07384 AC005410.1-202ENST00000460347 485 ntBASIC2.56□□□□□ -2
CAPN1P07384 MRPS17P3-201ENST00000465453 385 ntBASIC2.56□□□□□ -2
CAPN1P07384 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.56□□□□□ -2
CAPN1P07384 AC126182.1-201ENST00000478134 357 ntBASIC2.56□□□□□ -2
CAPN1P07384 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.56□□□□□ -2
CAPN1P07384 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.56□□□□□ -2
CAPN1P07384 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.56□□□□□ -2
CAPN1P07384 AC135721.1-201ENST00000497954 479 ntBASIC2.56□□□□□ -2
CAPN1P07384 SUMO2P6-201ENST00000505273 288 ntBASIC2.56□□□□□ -2
CAPN1P07384 AC008716.1-201ENST00000511084 513 ntBASIC2.56□□□□□ -2
CAPN1P07384 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.56□□□□□ -2
CAPN1P07384 RNA5SP471-201ENST00000516971 106 ntBASIC2.56□□□□□ -2
CAPN1P07384 NRON-201ENST00000517270 370 ntBASIC2.56□□□□□ -2
CAPN1P07384 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.56□□□□□ -2
CAPN1P07384 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.56□□□□□ -2
CAPN1P07384 OR4R1P-201ENST00000529879 463 ntBASIC2.56□□□□□ -2
CAPN1P07384 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.56□□□□□ -2
CAPN1P07384 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.56□□□□□ -2
CAPN1P07384 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.56□□□□□ -2
CAPN1P07384 AL391261.3-201ENST00000557194 520 ntBASIC2.56□□□□□ -2
CAPN1P07384 AC023813.2-201ENST00000564321 469 ntBASIC2.56□□□□□ -2
CAPN1P07384 TMF1P1-201ENST00000576058 373 ntBASIC2.56□□□□□ -2
CAPN1P07384 AC005951.2-201ENST00000576282 495 ntBASIC2.56□□□□□ -2
CAPN1P07384 AP001269.3-201ENST00000588718 329 ntBASIC2.56□□□□□ -2
CAPN1P07384 AL160237.3-201ENST00000604114 1013 ntBASIC2.56□□□□□ -2
CAPN1P07384 AC239868.4-201ENST00000608318 671 ntBASIC2.56□□□□□ -2
CAPN1P07384 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.56□□□□□ -2
CAPN1P07384 AC107075.1-201ENST00000613695 314 ntBASIC2.56□□□□□ -2
CAPN1P07384 TUG1_2.1-201ENST00000614234 87 ntBASIC2.56□□□□□ -2
CAPN1P07384 AC243829.7-201ENST00000633081 225 ntBASIC2.56□□□□□ -2
CAPN1P07384 MTND1P37-201ENST00000636562 264 ntBASIC2.56□□□□□ -2
CAPN1P07384 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms