Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
PDGFAP04085 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PDGFAP04085 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
PDGFAP04085 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.88□□□□□ -1.63
PDGFAP04085 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PDGFAP04085 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFAP04085 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFAP04085 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
PDGFAP04085 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
PDGFAP04085 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFAP04085 RNU6-806P-201ENST00000365147 105 ntBASIC4.87□□□□□ -1.63
PDGFAP04085 RNA5SP455-201ENST00000365190 119 ntBASIC4.87□□□□□ -1.63
PDGFAP04085 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFAP04085 OR2AM1P-201ENST00000422137 422 ntBASIC4.87□□□□□ -1.63
PDGFAP04085 AL132765.1-201ENST00000434165 553 ntBASIC4.87□□□□□ -1.63
PDGFAP04085 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.87□□□□□ -1.63
PDGFAP04085 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFAP04085 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.87□□□□□ -1.63
PDGFAP04085 AC092754.1-201ENST00000472975 479 ntBASIC4.87□□□□□ -1.63
PDGFAP04085 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC4.87□□□□□ -1.63
PDGFAP04085 AC104164.2-201ENST00000496953 495 ntBASIC4.87□□□□□ -1.63
PDGFAP04085 AC008958.1-201ENST00000511047 682 ntBASIC4.87□□□□□ -1.63
PDGFAP04085 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.87□□□□□ -1.63
PDGFAP04085 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.87□□□□□ -1.63
PDGFAP04085 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.87□□□□□ -1.63
PDGFAP04085 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.87□□□□□ -1.63
PDGFAP04085 RN7SL52P-201ENST00000584271 284 ntBASIC4.87□□□□□ -1.63
PDGFAP04085 AC008745.1-201ENST00000604064 271 ntBASIC4.87□□□□□ -1.63
PDGFAP04085 AC096772.1-201ENST00000609146 564 ntBASIC4.87□□□□□ -1.63
PDGFAP04085 RN7SL722P-201ENST00000617780 284 ntBASIC4.87□□□□□ -1.63
PDGFAP04085 RN7SL565P-201ENST00000618246 284 ntBASIC4.87□□□□□ -1.63
PDGFAP04085 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.87□□□□□ -1.63
PDGFAP04085 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFAP04085 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFAP04085 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFAP04085 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFAP04085 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
PDGFAP04085 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFAP04085 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.87□□□□□ -1.63
PDGFAP04085 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.87□□□□□ -1.63
PDGFAP04085 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.87□□□□□ -1.63
PDGFAP04085 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
PDGFAP04085 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
PDGFAP04085 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFAP04085 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFAP04085 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PDGFAP04085 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDGFAP04085 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDGFAP04085 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.86□□□□□ -1.63
PDGFAP04085 Y_RNA.26-201ENST00000362539 101 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 Y_RNA.60-201ENST00000362831 98 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 RNU1-76P-201ENST00000362903 159 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 RNA5SP87-201ENST00000384155 118 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 RNU6-611P-201ENST00000384276 104 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 Y_RNA.562-201ENST00000384695 113 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 MIR600-201ENST00000385007 98 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 SNORA40C-201ENST00000391285 128 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 MTCYBP2-201ENST00000407745 171 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.86□□□□□ -1.63
PDGFAP04085 COX6B1P1-201ENST00000415962 213 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.86□□□□□ -1.63
PDGFAP04085 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDGFAP04085 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.86□□□□□ -1.63
PDGFAP04085 snoU13.4-201ENST00000458916 104 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.86□□□□□ -1.63
PDGFAP04085 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.86□□□□□ -1.63
PDGFAP04085 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.86□□□□□ -1.63
PDGFAP04085 OR7H2P-201ENST00000513483 306 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 RNU6-612P-201ENST00000516909 102 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 SNORA31.19-201ENST00000517079 126 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 AP003733.2-201ENST00000529409 171 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.86□□□□□ -1.63
PDGFAP04085 HMGB1P14-201ENST00000557424 591 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 MIR4691-201ENST00000583764 85 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.86□□□□□ -1.63
PDGFAP04085 AC234771.5-201ENST00000600161 514 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 AL139395.1-201ENST00000603662 160 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 AC009318.2-201ENST00000610917 651 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 AL355810.1-201ENST00000614629 552 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 MIR7703-201ENST00000620784 77 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 AC243829.7-201ENST00000633081 225 ntBASIC4.86□□□□□ -1.63
PDGFAP04085 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PDGFAP04085 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PDGFAP04085 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDGFAP04085 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.86□□□□□ -1.63
PDGFAP04085 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDGFAP04085 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
PDGFAP04085 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PDGFAP04085 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.86□□□□□ -1.63
PDGFAP04085 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDGFAP04085 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PDGFAP04085 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
PDGFAP04085 AL359693.1-201ENST00000614959 2407 ntBASIC4.85□□□□□ -1.63
PDGFAP04085 NEAT1-202ENST00000501122 22743 ntBASIC4.85□□□□□ -1.63
PDGFAP04085 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.85□□□□□ -1.63
PDGFAP04085 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.85□□□□□ -1.63
PDGFAP04085 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PDGFAP04085 AL078599.1-201ENST00000402075 293 ntBASIC4.85□□□□□ -1.63
PDGFAP04085 MIR1271-201ENST00000408537 86 ntBASIC4.85□□□□□ -1.63
PDGFAP04085 RNA5SP494-201ENST00000410653 129 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms