Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 DUXAP9-208ENST00000622815 614 ntBASIC2.03□□□□□ -2.08
APOEP02649 AL590396.4-201ENST00000636779 956 ntBASIC2.03□□□□□ -2.08
APOEP02649 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.03□□□□□ -2.08
APOEP02649 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
APOEP02649 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
APOEP02649 MTND4P27-201ENST00000450813 1354 ntBASIC2.02□□□□□ -2.09
APOEP02649 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
APOEP02649 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.02□□□□□ -2.09
APOEP02649 RNU6-76P-201ENST00000384060 104 ntBASIC2.02□□□□□ -2.09
APOEP02649 MTCO2P31-201ENST00000402702 684 ntBASIC2.02□□□□□ -2.09
APOEP02649 RPL17P12-201ENST00000413391 526 ntBASIC2.02□□□□□ -2.09
APOEP02649 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.02□□□□□ -2.09
APOEP02649 AC092634.6-201ENST00000418558 192 ntBASIC2.02□□□□□ -2.09
APOEP02649 EIF1AXP1-201ENST00000419267 435 ntBASIC2.02□□□□□ -2.09
APOEP02649 AL109913.1-201ENST00000421173 514 ntBASIC2.02□□□□□ -2.09
APOEP02649 BX276092.3-201ENST00000424182 230 ntBASIC2.02□□□□□ -2.09
APOEP02649 TRIM60P13-201ENST00000432350 1283 ntBASIC2.02□□□□□ -2.09
APOEP02649 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.02□□□□□ -2.09
APOEP02649 AC010095.1-201ENST00000443543 144 ntBASIC2.02□□□□□ -2.09
APOEP02649 MTATP6P7-201ENST00000453315 681 ntBASIC2.02□□□□□ -2.09
APOEP02649 KLF3P2-201ENST00000465138 268 ntBASIC2.02□□□□□ -2.09
APOEP02649 UBL5P3-201ENST00000475112 231 ntBASIC2.02□□□□□ -2.09
APOEP02649 RPL21P47-201ENST00000483696 477 ntBASIC2.02□□□□□ -2.09
APOEP02649 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.02□□□□□ -2.09
APOEP02649 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.02□□□□□ -2.09
APOEP02649 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC2.02□□□□□ -2.09
APOEP02649 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.02□□□□□ -2.09
APOEP02649 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.02□□□□□ -2.09
APOEP02649 NRBF2P1-201ENST00000587407 859 ntBASIC2.02□□□□□ -2.09
APOEP02649 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.02□□□□□ -2.09
APOEP02649 AC103710.2-201ENST00000609912 942 ntBASIC2.02□□□□□ -2.09
APOEP02649 AC025594.3-201ENST00000613068 790 ntBASIC2.02□□□□□ -2.09
APOEP02649 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
APOEP02649 VN1R9P-201ENST00000614184 867 ntBASIC2.02□□□□□ -2.09
APOEP02649 AP001486.3-201ENST00000615334 372 ntBASIC2.02□□□□□ -2.09
APOEP02649 MIR6130-201ENST00000619419 109 ntBASIC2.02□□□□□ -2.09
APOEP02649 AC080188.3-201ENST00000624842 748 ntBASIC2.02□□□□□ -2.09
APOEP02649 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.02□□□□□ -2.09
APOEP02649 AC009487.4-201ENST00000624969 3585 ntBASIC2.01□□□□□ -2.09
APOEP02649 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
APOEP02649 AL133264.1-201ENST00000407157 562 ntBASIC2.01□□□□□ -2.09
APOEP02649 RNU2-28P-201ENST00000410457 189 ntBASIC2.01□□□□□ -2.09
APOEP02649 AC018630.2-202ENST00000422992 927 ntBASIC2.01□□□□□ -2.09
APOEP02649 Z80107.1-201ENST00000436830 412 ntBASIC2.01□□□□□ -2.09
APOEP02649 AL353691.1-201ENST00000451332 387 ntBASIC2.01□□□□□ -2.09
APOEP02649 GTF2IP12-201ENST00000456547 356 ntBASIC2.01□□□□□ -2.09
APOEP02649 RNU7-140P-201ENST00000459546 60 ntBASIC2.01□□□□□ -2.09
APOEP02649 AC072039.1-201ENST00000477611 581 ntBASIC2.01□□□□□ -2.09
APOEP02649 AC105252.1-201ENST00000503089 286 ntBASIC2.01□□□□□ -2.09
APOEP02649 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.01□□□□□ -2.09
APOEP02649 AC114786.4-201ENST00000508771 728 ntBASIC2.01□□□□□ -2.09
APOEP02649 AC114797.1-201ENST00000514003 728 ntBASIC2.01□□□□□ -2.09
APOEP02649 SNORA48.10-201ENST00000516965 160 ntBASIC2.01□□□□□ -2.09
APOEP02649 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.01□□□□□ -2.09
APOEP02649 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.01□□□□□ -2.09
APOEP02649 AC124947.2-202ENST00000552735 133 ntBASIC2.01□□□□□ -2.09
APOEP02649 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.01□□□□□ -2.09
APOEP02649 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.01□□□□□ -2.09
APOEP02649 MTND4LP5-201ENST00000605152 292 ntBASIC2.01□□□□□ -2.09
APOEP02649 YWHAEP7-203ENST00000622054 312 ntBASIC2.01□□□□□ -2.09
APOEP02649 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.01□□□□□ -2.09
APOEP02649 AL512506.2-201ENST00000624472 458 ntBASIC2.01□□□□□ -2.09
APOEP02649 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.01□□□□□ -2.09
APOEP02649 AC026634.1-201ENST00000634369 198 ntBASIC2.01□□□□□ -2.09
APOEP02649 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.01□□□□□ -2.09
APOEP02649 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.01□□□□□ -2.09
APOEP02649 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2□□□□□ -2.09
APOEP02649 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2□□□□□ -2.09
APOEP02649 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2□□□□□ -2.09
APOEP02649 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
APOEP02649 HMGB1P17-201ENST00000403495 628 ntBASIC2□□□□□ -2.09
APOEP02649 RNU6-1140P-201ENST00000410517 106 ntBASIC2□□□□□ -2.09
APOEP02649 RNU2-49P-201ENST00000410666 184 ntBASIC2□□□□□ -2.09
APOEP02649 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2□□□□□ -2.09
APOEP02649 SFR1P2-201ENST00000421841 730 ntBASIC2□□□□□ -2.09
APOEP02649 AL445685.2-201ENST00000422551 342 ntBASIC2□□□□□ -2.09
APOEP02649 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2□□□□□ -2.09
APOEP02649 HMGN2P3-201ENST00000433603 273 ntBASIC2□□□□□ -2.09
APOEP02649 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2□□□□□ -2.09
APOEP02649 HMGN2P5-201ENST00000436882 273 ntBASIC2□□□□□ -2.09
APOEP02649 BNIP3P2-201ENST00000441221 577 ntBASIC2□□□□□ -2.09
APOEP02649 OSTCP8-201ENST00000445117 448 ntBASIC2□□□□□ -2.09
APOEP02649 MRPS17P3-201ENST00000465453 385 ntBASIC2□□□□□ -2.09
APOEP02649 DYNLL1P5-201ENST00000467158 270 ntBASIC2□□□□□ -2.09
APOEP02649 XACT-201ENST00000468762 497 ntTSL 5 BASIC2□□□□□ -2.09
APOEP02649 TRBV1-201ENST00000476502 284 ntBASIC2□□□□□ -2.09
APOEP02649 AC013828.1-201ENST00000481845 158 ntBASIC2□□□□□ -2.09
APOEP02649 RN7SL274P-201ENST00000492268 272 ntBASIC2□□□□□ -2.09
APOEP02649 SCARNA15.2-201ENST00000516409 127 ntBASIC2□□□□□ -2.09
APOEP02649 SCARNA11.3-201ENST00000517276 130 ntBASIC2□□□□□ -2.09
APOEP02649 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2□□□□□ -2.09
APOEP02649 HMGB1P1-201ENST00000522557 636 ntBASIC2□□□□□ -2.09
APOEP02649 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2□□□□□ -2.09
APOEP02649 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
APOEP02649 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2□□□□□ -2.09
APOEP02649 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2□□□□□ -2.09
APOEP02649 AL158827.2-201ENST00000602494 330 ntBASIC2□□□□□ -2.09
APOEP02649 DUXAP11-201ENST00000603858 526 ntBASIC2□□□□□ -2.09
APOEP02649 AL691447.3-201ENST00000635020 330 ntBASIC2□□□□□ -2.09
APOEP02649 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms