Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC126177.8-201ENST00000618339 1015 ntBASIC0.98□□□□□ -2.25
SPTA1P02549 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SPTA1P02549 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
SPTA1P02549 RNU1-148P-201ENST00000384472 162 ntBASIC0.98□□□□□ -2.25
SPTA1P02549 HMGB3P31-201ENST00000413333 595 ntBASIC0.98□□□□□ -2.25
SPTA1P02549 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC0.98□□□□□ -2.25
SPTA1P02549 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.98□□□□□ -2.25
SPTA1P02549 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.98□□□□□ -2.25
SPTA1P02549 AC244035.1-201ENST00000430042 390 ntBASIC0.98□□□□□ -2.25
SPTA1P02549 ARL5AP2-201ENST00000444698 533 ntBASIC0.98□□□□□ -2.25
SPTA1P02549 RNU6-1218P-201ENST00000458990 108 ntBASIC0.98□□□□□ -2.25
SPTA1P02549 AC104685.1-201ENST00000502445 371 ntBASIC0.98□□□□□ -2.25
SPTA1P02549 AC009901.1-201ENST00000506703 541 ntBASIC0.98□□□□□ -2.25
SPTA1P02549 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.98□□□□□ -2.25
SPTA1P02549 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC0.98□□□□□ -2.25
SPTA1P02549 AC079148.1-201ENST00000565944 819 ntBASIC0.98□□□□□ -2.25
SPTA1P02549 AC116563.2-201ENST00000624751 535 ntBASIC0.98□□□□□ -2.25
SPTA1P02549 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC0.98□□□□□ -2.25
SPTA1P02549 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
SPTA1P02549 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
SPTA1P02549 AL157700.1-201ENST00000561973 1432 ntBASIC0.97□□□□□ -2.25
SPTA1P02549 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.97□□□□□ -2.25
SPTA1P02549 SSXP10-201ENST00000402595 565 ntBASIC0.97□□□□□ -2.25
SPTA1P02549 SUMO2P12-201ENST00000405924 140 ntBASIC0.97□□□□□ -2.25
SPTA1P02549 AC000111.3-201ENST00000433478 193 ntBASIC0.97□□□□□ -2.25
SPTA1P02549 AC010683.1-201ENST00000473673 378 ntBASIC0.97□□□□□ -2.25
SPTA1P02549 RPL30P12-201ENST00000474666 353 ntBASIC0.97□□□□□ -2.25
SPTA1P02549 AC093852.1-201ENST00000503587 266 ntBASIC0.97□□□□□ -2.25
SPTA1P02549 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC0.97□□□□□ -2.25
SPTA1P02549 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.97□□□□□ -2.25
SPTA1P02549 HMGB1P46-201ENST00000520062 610 ntBASIC0.97□□□□□ -2.25
SPTA1P02549 AP005597.4-201ENST00000526762 229 ntBASIC0.97□□□□□ -2.25
SPTA1P02549 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC0.97□□□□□ -2.25
SPTA1P02549 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC0.97□□□□□ -2.25
SPTA1P02549 DUXAP4-201ENST00000603046 613 ntBASIC0.97□□□□□ -2.25
SPTA1P02549 AC012213.4-201ENST00000606457 354 ntBASIC0.97□□□□□ -2.25
SPTA1P02549 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC0.97□□□□□ -2.25
SPTA1P02549 RNU1-52P-201ENST00000384190 164 ntBASIC0.97□□□□□ -2.25
SPTA1P02549 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.97□□□□□ -2.25
SPTA1P02549 TRGV6-201ENST00000417928 299 ntBASIC0.97□□□□□ -2.25
SPTA1P02549 AC233728.2-201ENST00000425348 757 ntBASIC0.97□□□□□ -2.25
SPTA1P02549 GPM6BP3-201ENST00000442797 145 ntBASIC0.97□□□□□ -2.25
SPTA1P02549 RPS23P3-201ENST00000470993 430 ntBASIC0.97□□□□□ -2.25
SPTA1P02549 HMGN2P13-201ENST00000476476 274 ntBASIC0.97□□□□□ -2.25
SPTA1P02549 TRBV8-1-201ENST00000481590 279 ntBASIC0.97□□□□□ -2.25
SPTA1P02549 AC022493.1-201ENST00000492984 337 ntBASIC0.97□□□□□ -2.25
SPTA1P02549 LIAS-206ENST00000513731 826 ntTSL 5 BASIC0.97□□□□□ -2.25
SPTA1P02549 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.97□□□□□ -2.25
SPTA1P02549 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC0.97□□□□□ -2.25
SPTA1P02549 AC023050.2-201ENST00000544968 387 ntBASIC0.97□□□□□ -2.25
SPTA1P02549 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC0.97□□□□□ -2.25
SPTA1P02549 AC116618.1-201ENST00000634617 774 ntBASIC0.97□□□□□ -2.25
SPTA1P02549 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC0.96□□□□□ -2.26
SPTA1P02549 RNU6-666P-201ENST00000363499 107 ntBASIC0.96□□□□□ -2.26
SPTA1P02549 RNU2-71P-201ENST00000411395 189 ntBASIC0.96□□□□□ -2.26
SPTA1P02549 ELOCP6-201ENST00000429066 328 ntBASIC0.96□□□□□ -2.26
SPTA1P02549 AL121601.2-201ENST00000438019 707 ntBASIC0.96□□□□□ -2.26
SPTA1P02549 Z96811.1-201ENST00000445880 108 ntBASIC0.96□□□□□ -2.26
SPTA1P02549 ELOCP12-201ENST00000458706 328 ntBASIC0.96□□□□□ -2.26
SPTA1P02549 RPS15AP34-201ENST00000487776 387 ntBASIC0.96□□□□□ -2.26
SPTA1P02549 RNU1-104P-201ENST00000517280 175 ntBASIC0.96□□□□□ -2.26
SPTA1P02549 AC087808.1-201ENST00000520501 361 ntBASIC0.96□□□□□ -2.26
SPTA1P02549 AC125611.2-201ENST00000551907 647 ntBASIC0.96□□□□□ -2.26
SPTA1P02549 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.96□□□□□ -2.26
SPTA1P02549 MIR7974-201ENST00000615835 79 ntBASIC0.96□□□□□ -2.26
SPTA1P02549 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SPTA1P02549 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC0.96□□□□□ -2.26
SPTA1P02549 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SPTA1P02549 RNU6-288P-201ENST00000363690 104 ntBASIC0.96□□□□□ -2.26
SPTA1P02549 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC0.96□□□□□ -2.26
SPTA1P02549 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC0.96□□□□□ -2.26
SPTA1P02549 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SPTA1P02549 AF279873.1-201ENST00000523393 313 ntBASIC0.96□□□□□ -2.26
SPTA1P02549 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.96□□□□□ -2.26
SPTA1P02549 AP001180.3-201ENST00000582221 145 ntBASIC0.96□□□□□ -2.26
SPTA1P02549 AL512605.2-201ENST00000592972 256 ntBASIC0.96□□□□□ -2.26
SPTA1P02549 AC010200.2-201ENST00000605098 235 ntBASIC0.96□□□□□ -2.26
SPTA1P02549 AC021755.4-201ENST00000616620 456 ntBASIC0.96□□□□□ -2.26
SPTA1P02549 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC0.96□□□□□ -2.26
SPTA1P02549 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC0.96□□□□□ -2.26
SPTA1P02549 MIR6759-201ENST00000638110 65 ntBASIC0.96□□□□□ -2.26
SPTA1P02549 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.95□□□□□ -2.26
SPTA1P02549 RNU6-50P-201ENST00000362356 103 ntBASIC0.95□□□□□ -2.26
SPTA1P02549 FCF1P2-201ENST00000415284 583 ntBASIC0.95□□□□□ -2.26
SPTA1P02549 HMGB1P49-201ENST00000418882 569 ntBASIC0.95□□□□□ -2.26
SPTA1P02549 AL627224.1-201ENST00000448334 444 ntBASIC0.95□□□□□ -2.26
SPTA1P02549 AC114322.1-201ENST00000506771 926 ntBASIC0.95□□□□□ -2.26
SPTA1P02549 CDC42P4-201ENST00000510507 563 ntBASIC0.95□□□□□ -2.26
SPTA1P02549 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.95□□□□□ -2.26
SPTA1P02549 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC0.95□□□□□ -2.26
SPTA1P02549 AC004241.3-201ENST00000611728 517 ntBASIC0.95□□□□□ -2.26
SPTA1P02549 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC0.95□□□□□ -2.26
SPTA1P02549 AC013268.2-201ENST00000420753 337 ntBASIC0.95□□□□□ -2.26
SPTA1P02549 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC0.95□□□□□ -2.26
SPTA1P02549 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.95□□□□□ -2.26
SPTA1P02549 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.95□□□□□ -2.26
SPTA1P02549 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SPTA1P02549 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC0.95□□□□□ -2.26
SPTA1P02549 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
SPTA1P02549 APOOP3-201ENST00000536787 586 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms