Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.98□□□□□ -1.93
PDGFBP01127 AC116347.2-201ENST00000514912 523 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 Y_RNA.673-201ENST00000516306 88 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 RNU6-232P-201ENST00000517144 64 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.98□□□□□ -1.93
PDGFBP01127 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.98□□□□□ -1.93
PDGFBP01127 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.98□□□□□ -1.93
PDGFBP01127 SETP2-201ENST00000553886 926 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 AL355836.1-201ENST00000555951 870 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 TGIF1P1-201ENST00000558095 802 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.98□□□□□ -1.93
PDGFBP01127 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.98□□□□□ -1.93
PDGFBP01127 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.98□□□□□ -1.93
PDGFBP01127 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.98□□□□□ -1.93
PDGFBP01127 AC091931.1-201ENST00000623488 728 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 AF246928.1-201ENST00000623768 87 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 AC079597.1-201ENST00000624306 508 ntBASIC2.98□□□□□ -1.93
PDGFBP01127 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PDGFBP01127 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
PDGFBP01127 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PDGFBP01127 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
PDGFBP01127 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PDGFBP01127 RNU6-223P-201ENST00000362830 107 ntBASIC2.97□□□□□ -1.93
PDGFBP01127 MTCYBP36-201ENST00000404146 440 ntBASIC2.97□□□□□ -1.93
PDGFBP01127 RNU6-516P-201ENST00000411381 104 ntBASIC2.97□□□□□ -1.93
PDGFBP01127 MTCO1P17-201ENST00000411522 491 ntBASIC2.97□□□□□ -1.93
PDGFBP01127 VPS26BP1-201ENST00000417155 755 ntBASIC2.97□□□□□ -1.93
PDGFBP01127 AC012498.1-201ENST00000424037 437 ntBASIC2.97□□□□□ -1.93
PDGFBP01127 AC092447.3-201ENST00000426027 686 ntBASIC2.97□□□□□ -1.93
PDGFBP01127 TOMM20P4-201ENST00000427861 435 ntBASIC2.97□□□□□ -1.93
PDGFBP01127 SAR1AP4-201ENST00000429225 591 ntBASIC2.97□□□□□ -1.93
PDGFBP01127 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.97□□□□□ -1.93
PDGFBP01127 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.97□□□□□ -1.93
PDGFBP01127 BMI1P1-201ENST00000445879 941 ntBASIC2.97□□□□□ -1.93
PDGFBP01127 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.97□□□□□ -1.93
PDGFBP01127 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.97□□□□□ -1.93
PDGFBP01127 snoU13.28-201ENST00000459235 104 ntBASIC2.97□□□□□ -1.93
PDGFBP01127 RPS20P20-201ENST00000460498 340 ntBASIC2.97□□□□□ -1.93
PDGFBP01127 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.97□□□□□ -1.93
PDGFBP01127 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PDGFBP01127 TTC39CP1-201ENST00000512513 755 ntBASIC2.97□□□□□ -1.93
PDGFBP01127 MTATP6P15-201ENST00000527233 835 ntBASIC2.97□□□□□ -1.93
PDGFBP01127 AP003497.1-201ENST00000528472 562 ntBASIC2.97□□□□□ -1.93
PDGFBP01127 AP002748.2-201ENST00000528671 348 ntBASIC2.97□□□□□ -1.93
PDGFBP01127 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PDGFBP01127 TRAV37-201ENST00000553906 342 ntBASIC2.97□□□□□ -1.93
PDGFBP01127 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.97□□□□□ -1.93
PDGFBP01127 MIR544B-201ENST00000582372 78 ntBASIC2.97□□□□□ -1.93
PDGFBP01127 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.97□□□□□ -1.93
PDGFBP01127 AC015871.2-201ENST00000603605 948 ntBASIC2.97□□□□□ -1.93
PDGFBP01127 AL603758.1-201ENST00000618654 241 ntBASIC2.97□□□□□ -1.93
PDGFBP01127 AC007318.2-201ENST00000620999 243 ntBASIC2.97□□□□□ -1.93
PDGFBP01127 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
PDGFBP01127 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PDGFBP01127 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PDGFBP01127 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
PDGFBP01127 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
PDGFBP01127 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
PDGFBP01127 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.96□□□□□ -1.94
PDGFBP01127 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
PDGFBP01127 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.96□□□□□ -1.94
PDGFBP01127 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
PDGFBP01127 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
PDGFBP01127 AC138915.1-201ENST00000565427 1685 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 RNU6-851P-201ENST00000384565 107 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 SNORA67.4-201ENST00000384688 142 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 RNU6-114P-201ENST00000384704 105 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PDGFBP01127 SNORA3.2-201ENST00000408221 125 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 RNU4-72P-201ENST00000410754 173 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 RPL7P8-201ENST00000411964 730 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.96□□□□□ -1.94
PDGFBP01127 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.96□□□□□ -1.94
PDGFBP01127 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.96□□□□□ -1.94
PDGFBP01127 AL445669.1-201ENST00000426743 755 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 Z82210.1-201ENST00000440037 231 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 CBWD4P-201ENST00000445695 655 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 AP000936.2-201ENST00000447151 681 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 AP000542.1-201ENST00000448473 371 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 AC098826.2-201ENST00000452011 651 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.96□□□□□ -1.94
PDGFBP01127 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.96□□□□□ -1.94
PDGFBP01127 OR6K1P-201ENST00000456766 971 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 BET1P1-201ENST00000482276 359 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 RAC1P5-201ENST00000512182 576 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 Y_RNA.676-201ENST00000516393 96 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
PDGFBP01127 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.96□□□□□ -1.94
PDGFBP01127 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.96□□□□□ -1.94
PDGFBP01127 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.96□□□□□ -1.94
PDGFBP01127 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.96□□□□□ -1.94
PDGFBP01127 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.96□□□□□ -1.94
PDGFBP01127 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.96□□□□□ -1.94
PDGFBP01127 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.96□□□□□ -1.94
PDGFBP01127 AC090616.2-202ENST00000584248 222 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 AL158827.2-201ENST00000602494 330 ntBASIC2.96□□□□□ -1.94
PDGFBP01127 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PDGFBP01127 AC022079.1-201ENST00000621546 602 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms