Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC240442.1-201ENST00000616055 283 ntBASIC5.71□□□□□ -1.5
ALDH1A1P00352 AC034229.5-201ENST00000624258 185 ntBASIC5.71□□□□□ -1.5
ALDH1A1P00352 AC007529.1-201ENST00000418574 2178 ntBASIC5.71□□□□□ -1.5
ALDH1A1P00352 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
ALDH1A1P00352 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
ALDH1A1P00352 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ALDH1A1P00352 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
ALDH1A1P00352 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
ALDH1A1P00352 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.71□□□□□ -1.5
ALDH1A1P00352 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ALDH1A1P00352 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
ALDH1A1P00352 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ALDH1A1P00352 AL121839.2-201ENST00000565058 6943 ntBASIC5.7□□□□□ -1.5
ALDH1A1P00352 AC015813.6-201ENST00000624409 5808 ntBASIC5.7□□□□□ -1.5
ALDH1A1P00352 AC006206.1-201ENST00000544842 3387 ntBASIC5.7□□□□□ -1.5
ALDH1A1P00352 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ALDH1A1P00352 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.7□□□□□ -1.5
ALDH1A1P00352 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ALDH1A1P00352 Y_RNA.358-201ENST00000365491 99 ntBASIC5.7□□□□□ -1.5
ALDH1A1P00352 RNU6-607P-201ENST00000411283 108 ntBASIC5.7□□□□□ -1.5
ALDH1A1P00352 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.7□□□□□ -1.5
ALDH1A1P00352 AC009238.2-201ENST00000431026 355 ntBASIC5.7□□□□□ -1.5
ALDH1A1P00352 CYCSP43-201ENST00000438233 310 ntBASIC5.7□□□□□ -1.5
ALDH1A1P00352 AC008267.6-201ENST00000441664 139 ntBASIC5.7□□□□□ -1.5
ALDH1A1P00352 PIGFP3-201ENST00000441918 722 ntBASIC5.7□□□□□ -1.5
ALDH1A1P00352 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.7□□□□□ -1.5
ALDH1A1P00352 RNU6-1218P-201ENST00000458990 108 ntBASIC5.7□□□□□ -1.5
ALDH1A1P00352 AC006511.1-201ENST00000470614 315 ntBASIC5.7□□□□□ -1.5
ALDH1A1P00352 AC098976.1-201ENST00000513014 541 ntBASIC5.7□□□□□ -1.5
ALDH1A1P00352 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC5.7□□□□□ -1.5
ALDH1A1P00352 FAM60BP-201ENST00000578364 658 ntBASIC5.7□□□□□ -1.5
ALDH1A1P00352 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.7□□□□□ -1.5
ALDH1A1P00352 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ALDH1A1P00352 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
ALDH1A1P00352 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ALDH1A1P00352 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ALDH1A1P00352 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ALDH1A1P00352 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.7□□□□□ -1.5
ALDH1A1P00352 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
ALDH1A1P00352 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
ALDH1A1P00352 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
ALDH1A1P00352 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.69□□□□□ -1.5
ALDH1A1P00352 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
ALDH1A1P00352 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ALDH1A1P00352 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ALDH1A1P00352 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ALDH1A1P00352 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.69□□□□□ -1.5
ALDH1A1P00352 RNU6-326P-201ENST00000365480 107 ntBASIC5.69□□□□□ -1.5
ALDH1A1P00352 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ALDH1A1P00352 SNORD116-18-201ENST00000383961 92 ntBASIC5.69□□□□□ -1.5
ALDH1A1P00352 RNU11-201ENST00000387069 134 ntBASIC5.69□□□□□ -1.5
ALDH1A1P00352 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ALDH1A1P00352 MIR190B-201ENST00000401119 79 ntBASIC5.69□□□□□ -1.5
ALDH1A1P00352 Y_RNA.597-201ENST00000410463 100 ntBASIC5.69□□□□□ -1.5
ALDH1A1P00352 CYCSP33-201ENST00000414485 327 ntBASIC5.69□□□□□ -1.5
ALDH1A1P00352 MTCO1P5-201ENST00000433573 344 ntBASIC5.69□□□□□ -1.5
ALDH1A1P00352 AC114982.1-201ENST00000469402 321 ntBASIC5.69□□□□□ -1.5
ALDH1A1P00352 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.69□□□□□ -1.5
ALDH1A1P00352 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ALDH1A1P00352 AC023824.2-201ENST00000566185 400 ntBASIC5.69□□□□□ -1.5
ALDH1A1P00352 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.69□□□□□ -1.5
ALDH1A1P00352 MIR3939-201ENST00000582614 106 ntBASIC5.69□□□□□ -1.5
ALDH1A1P00352 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.69□□□□□ -1.5
ALDH1A1P00352 AL360012.1-201ENST00000602813 131 ntBASIC5.69□□□□□ -1.5
ALDH1A1P00352 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC5.69□□□□□ -1.5
ALDH1A1P00352 FAM27B-201ENST00000610601 213 ntBASIC5.69□□□□□ -1.5
ALDH1A1P00352 AC023043.4-201ENST00000612081 449 ntBASIC5.69□□□□□ -1.5
ALDH1A1P00352 AC019206.1-201ENST00000621938 425 ntBASIC5.69□□□□□ -1.5
ALDH1A1P00352 AC008785.1-201ENST00000624475 456 ntBASIC5.69□□□□□ -1.5
ALDH1A1P00352 DDX10P1-201ENST00000448545 1933 ntBASIC5.69□□□□□ -1.5
ALDH1A1P00352 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ALDH1A1P00352 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.69□□□□□ -1.5
ALDH1A1P00352 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
ALDH1A1P00352 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ALDH1A1P00352 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ALDH1A1P00352 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ALDH1A1P00352 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
ALDH1A1P00352 GVINP1-202ENST00000531871 7271 ntBASIC5.68□□□□□ -1.5
ALDH1A1P00352 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.68□□□□□ -1.5
ALDH1A1P00352 RNA5SP509-201ENST00000364577 119 ntBASIC5.68□□□□□ -1.5
ALDH1A1P00352 RNU6-923P-201ENST00000364753 107 ntBASIC5.68□□□□□ -1.5
ALDH1A1P00352 RNA5SP223-201ENST00000365174 120 ntBASIC5.68□□□□□ -1.5
ALDH1A1P00352 MIR578-201ENST00000384828 96 ntBASIC5.68□□□□□ -1.5
ALDH1A1P00352 HSPE1P8-201ENST00000406997 288 ntBASIC5.68□□□□□ -1.5
ALDH1A1P00352 Y_RNA.590-201ENST00000410140 107 ntBASIC5.68□□□□□ -1.5
ALDH1A1P00352 RNU2-61P-201ENST00000411069 191 ntBASIC5.68□□□□□ -1.5
ALDH1A1P00352 RNU5E-9P-201ENST00000411164 104 ntBASIC5.68□□□□□ -1.5
ALDH1A1P00352 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.68□□□□□ -1.5
ALDH1A1P00352 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.68□□□□□ -1.5
ALDH1A1P00352 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.68□□□□□ -1.5
ALDH1A1P00352 RPS11P1-201ENST00000451072 473 ntBASIC5.68□□□□□ -1.5
ALDH1A1P00352 snoU13.29-201ENST00000459370 104 ntBASIC5.68□□□□□ -1.5
ALDH1A1P00352 Y_RNA.638-201ENST00000459374 113 ntBASIC5.68□□□□□ -1.5
ALDH1A1P00352 AC011276.1-201ENST00000469688 323 ntBASIC5.68□□□□□ -1.5
ALDH1A1P00352 VN1R105P-201ENST00000486595 910 ntBASIC5.68□□□□□ -1.5
ALDH1A1P00352 RNU6-1012P-201ENST00000516606 109 ntBASIC5.68□□□□□ -1.5
ALDH1A1P00352 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.68□□□□□ -1.5
ALDH1A1P00352 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.68□□□□□ -1.5
ALDH1A1P00352 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.68□□□□□ -1.5
ALDH1A1P00352 RN7SL652P-201ENST00000577769 300 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms