Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 MIR203B-201ENST00000636080 86 ntBASIC2.16□□□□□ -2.06
VAPBO95292 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
VAPBO95292 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
VAPBO95292 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.16□□□□□ -2.06
VAPBO95292 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.06
VAPBO95292 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.15□□□□□ -2.06
VAPBO95292 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.15□□□□□ -2.06
VAPBO95292 RNU6-884P-201ENST00000363889 107 ntBASIC2.15□□□□□ -2.07
VAPBO95292 RNU6-637P-201ENST00000384050 107 ntBASIC2.15□□□□□ -2.07
VAPBO95292 RNU6-301P-201ENST00000384277 107 ntBASIC2.15□□□□□ -2.07
VAPBO95292 SNORA51.11-201ENST00000384442 131 ntBASIC2.15□□□□□ -2.07
VAPBO95292 SNORA48.3-201ENST00000391081 134 ntBASIC2.15□□□□□ -2.07
VAPBO95292 MIR888-201ENST00000401186 77 ntBASIC2.15□□□□□ -2.07
VAPBO95292 AL109755.1-201ENST00000401791 649 ntBASIC2.15□□□□□ -2.07
VAPBO95292 TPMTP3-201ENST00000411928 735 ntBASIC2.15□□□□□ -2.07
VAPBO95292 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.15□□□□□ -2.07
VAPBO95292 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.07
VAPBO95292 AC007560.1-201ENST00000426912 237 ntBASIC2.15□□□□□ -2.07
VAPBO95292 HMGB1P9-201ENST00000429856 646 ntBASIC2.15□□□□□ -2.07
VAPBO95292 USP12PX-201ENST00000432383 1057 ntBASIC2.15□□□□□ -2.07
VAPBO95292 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.15□□□□□ -2.07
VAPBO95292 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.15□□□□□ -2.07
VAPBO95292 AL591719.1-201ENST00000444669 744 ntBASIC2.15□□□□□ -2.07
VAPBO95292 AC090255.1-201ENST00000495779 349 ntBASIC2.15□□□□□ -2.07
VAPBO95292 AC008837.1-201ENST00000511513 412 ntBASIC2.15□□□□□ -2.07
VAPBO95292 SCARNA16.3-201ENST00000516595 184 ntBASIC2.15□□□□□ -2.07
VAPBO95292 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
VAPBO95292 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.15□□□□□ -2.07
VAPBO95292 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.15□□□□□ -2.07
VAPBO95292 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.15□□□□□ -2.07
VAPBO95292 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.15□□□□□ -2.07
VAPBO95292 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.15□□□□□ -2.07
VAPBO95292 MIR5002-201ENST00000584713 97 ntBASIC2.15□□□□□ -2.07
VAPBO95292 AC021749.1-201ENST00000604322 607 ntBASIC2.15□□□□□ -2.07
VAPBO95292 AC025588.2-201ENST00000604851 466 ntBASIC2.15□□□□□ -2.07
VAPBO95292 FTX_3.1-201ENST00000610451 147 ntBASIC2.15□□□□□ -2.07
VAPBO95292 SCARNA15.3-201ENST00000626315 122 ntBASIC2.15□□□□□ -2.07
VAPBO95292 SCARNA4.1-201ENST00000628597 123 ntBASIC2.15□□□□□ -2.07
VAPBO95292 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.15□□□□□ -2.07
VAPBO95292 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
VAPBO95292 Y_RNA.234-201ENST00000364409 97 ntBASIC2.14□□□□□ -2.07
VAPBO95292 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
VAPBO95292 RNU6-750P-201ENST00000390946 107 ntBASIC2.14□□□□□ -2.07
VAPBO95292 UBE2V1P2-201ENST00000397758 440 ntBASIC2.14□□□□□ -2.07
VAPBO95292 AL079342.2-201ENST00000403367 482 ntBASIC2.14□□□□□ -2.07
VAPBO95292 RNA5SP338-201ENST00000410495 85 ntBASIC2.14□□□□□ -2.07
VAPBO95292 AC096649.2-201ENST00000416186 393 ntBASIC2.14□□□□□ -2.07
VAPBO95292 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.14□□□□□ -2.07
VAPBO95292 AC079776.3-201ENST00000450665 370 ntBASIC2.14□□□□□ -2.07
VAPBO95292 ANKRD26P4-201ENST00000455755 950 ntBASIC2.14□□□□□ -2.07
VAPBO95292 AC022447.3-201ENST00000506865 495 ntBASIC2.14□□□□□ -2.07
VAPBO95292 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
VAPBO95292 HMGN1P28-201ENST00000521340 364 ntBASIC2.14□□□□□ -2.07
VAPBO95292 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
VAPBO95292 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.14□□□□□ -2.07
VAPBO95292 SNRPGP18-201ENST00000553000 214 ntBASIC2.14□□□□□ -2.07
VAPBO95292 AC135628.1-201ENST00000568867 534 ntBASIC2.14□□□□□ -2.07
VAPBO95292 OR4K7P-201ENST00000580232 945 ntBASIC2.14□□□□□ -2.07
VAPBO95292 AC245884.12-201ENST00000615364 59 ntBASIC2.14□□□□□ -2.07
VAPBO95292 AC253576.2-201ENST00000618815 580 ntBASIC2.14□□□□□ -2.07
VAPBO95292 AC073592.7-201ENST00000623659 507 ntBASIC2.14□□□□□ -2.07
VAPBO95292 IGHVIII-44-202ENST00000636235 289 ntBASIC2.14□□□□□ -2.07
VAPBO95292 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
VAPBO95292 AC004520.1-201ENST00000608362 1413 ntBASIC2.14□□□□□ -2.07
VAPBO95292 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
VAPBO95292 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
VAPBO95292 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.14□□□□□ -2.07
VAPBO95292 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VAPBO95292 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
VAPBO95292 RNU4-82P-201ENST00000362443 140 ntBASIC2.13□□□□□ -2.07
VAPBO95292 RNU6-236P-201ENST00000363886 106 ntBASIC2.13□□□□□ -2.07
VAPBO95292 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
VAPBO95292 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
VAPBO95292 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VAPBO95292 RNU4-72P-201ENST00000410754 173 ntBASIC2.13□□□□□ -2.07
VAPBO95292 HMGB3P2-201ENST00000411913 584 ntBASIC2.13□□□□□ -2.07
VAPBO95292 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.13□□□□□ -2.07
VAPBO95292 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.13□□□□□ -2.07
VAPBO95292 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.13□□□□□ -2.07
VAPBO95292 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VAPBO95292 USP9YP22-201ENST00000438971 294 ntBASIC2.13□□□□□ -2.07
VAPBO95292 RPL23AP7-203ENST00000449021 469 ntBASIC2.13□□□□□ -2.07
VAPBO95292 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.13□□□□□ -2.07
VAPBO95292 RPL12P25-201ENST00000455592 494 ntBASIC2.13□□□□□ -2.07
VAPBO95292 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VAPBO95292 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.13□□□□□ -2.07
VAPBO95292 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.13□□□□□ -2.07
VAPBO95292 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.13□□□□□ -2.07
VAPBO95292 SLC2A13P1-201ENST00000531560 322 ntBASIC2.13□□□□□ -2.07
VAPBO95292 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC2.13□□□□□ -2.07
VAPBO95292 AP002791.1-201ENST00000623291 381 ntBASIC2.13□□□□□ -2.07
VAPBO95292 MTND1P37-201ENST00000636562 264 ntBASIC2.13□□□□□ -2.07
VAPBO95292 AC006927.2-201ENST00000639256 389 ntBASIC2.13□□□□□ -2.07
VAPBO95292 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VAPBO95292 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
VAPBO95292 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
VAPBO95292 RNU6-97P-201ENST00000363387 104 ntBASIC2.12□□□□□ -2.07
VAPBO95292 SNORA23-201ENST00000365128 182 ntBASIC2.12□□□□□ -2.07
VAPBO95292 RNU1-73P-201ENST00000383971 164 ntBASIC2.12□□□□□ -2.07
VAPBO95292 RNU6-220P-201ENST00000390919 107 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms