Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 RNU6-456P-201ENST00000384493 107 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 MIR325-201ENST00000385260 98 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 AL138878.1-201ENST00000405131 347 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.23□□□□□ -1.89
NKX2-2O95096 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.23□□□□□ -1.89
NKX2-2O95096 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.23□□□□□ -1.89
NKX2-2O95096 AC007919.1-201ENST00000429380 217 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 MTATP6P16-201ENST00000434543 526 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.23□□□□□ -1.89
NKX2-2O95096 RPL21P133-201ENST00000443666 476 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.23□□□□□ -1.89
NKX2-2O95096 MTND1P1-201ENST00000445453 368 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 PRDX3P3-201ENST00000447765 522 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.23□□□□□ -1.89
NKX2-2O95096 RNU6-420P-201ENST00000458780 107 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 RNU6-953P-201ENST00000459154 107 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 RN7SL542P-201ENST00000467147 294 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 RPL30P14-201ENST00000482744 348 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 RPL9P6-201ENST00000492764 598 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 HSPD1P15-201ENST00000505573 1122 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 AC026427.2-201ENST00000506228 536 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.23□□□□□ -1.89
NKX2-2O95096 SNORA70.19-201ENST00000516717 90 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.23□□□□□ -1.89
NKX2-2O95096 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.23□□□□□ -1.89
NKX2-2O95096 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.23□□□□□ -1.89
NKX2-2O95096 AP001646.1-201ENST00000527936 915 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 AC103843.2-201ENST00000530523 682 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.23□□□□□ -1.89
NKX2-2O95096 SUB1P2-201ENST00000556401 297 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 AMZ2P1-203ENST00000565833 850 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.23□□□□□ -1.89
NKX2-2O95096 MIR4474-201ENST00000579189 78 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.23□□□□□ -1.89
NKX2-2O95096 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NKX2-2O95096 RNVU1-4-201ENST00000612985 164 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 PLCE1P1-201ENST00000622094 305 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 CR392039.5-201ENST00000623201 510 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 AC012442.3-202ENST00000636742 206 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 MTND5P42-201ENST00000637720 498 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 AC058791.1-201ENST00000608412 3198 ntBASIC3.23□□□□□ -1.89
NKX2-2O95096 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.23□□□□□ -1.89
NKX2-2O95096 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NKX2-2O95096 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
NKX2-2O95096 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
NKX2-2O95096 Y_RNA.159-201ENST00000363674 87 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 RN7SKP111-201ENST00000410349 271 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.22□□□□□ -1.89
NKX2-2O95096 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.22□□□□□ -1.89
NKX2-2O95096 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.22□□□□□ -1.89
NKX2-2O95096 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.22□□□□□ -1.89
NKX2-2O95096 MTCO2P19-201ENST00000427513 598 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 AP000907.1-201ENST00000428428 510 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 ATP5JP1-201ENST00000431631 322 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.22□□□□□ -1.89
NKX2-2O95096 AL451074.3-201ENST00000437709 472 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.22□□□□□ -1.89
NKX2-2O95096 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.22□□□□□ -1.89
NKX2-2O95096 RBMY2UP-201ENST00000453474 324 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 RPL7P5-201ENST00000471472 736 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 AC012181.1-201ENST00000479895 423 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 AC116562.3-201ENST00000506136 177 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 APOOP4-201ENST00000513530 597 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 RNU6-677P-201ENST00000516914 101 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 RNA5SP471-201ENST00000516971 106 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 FAM92A1P1-201ENST00000528023 890 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 AC068587.5-201ENST00000528506 175 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 OR5B19P-201ENST00000531766 928 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.22□□□□□ -1.89
NKX2-2O95096 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.22□□□□□ -1.89
NKX2-2O95096 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.22□□□□□ -1.89
NKX2-2O95096 TGIF1P1-201ENST00000558095 802 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.22□□□□□ -1.89
NKX2-2O95096 AC098826.3-201ENST00000603823 466 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 AL391646.1-201ENST00000603860 190 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 AL161798.1-201ENST00000604630 131 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 HSPE1P7-201ENST00000604681 321 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 AC107294.1-201ENST00000609524 467 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
NKX2-2O95096 AL138880.2-201ENST00000616214 239 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 AL357559.1-201ENST00000622228 274 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 AL034408.1-202ENST00000636088 415 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.22□□□□□ -1.89
NKX2-2O95096 AC099654.12-201ENST00000639868 649 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 AC032011.1-201ENST00000611703 1549 ntBASIC3.22□□□□□ -1.89
NKX2-2O95096 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NKX2-2O95096 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.21□□□□□ -1.89
NKX2-2O95096 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
NKX2-2O95096 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
NKX2-2O95096 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NKX2-2O95096 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
NKX2-2O95096 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.21□□□□□ -1.9
NKX2-2O95096 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
NKX2-2O95096 Y_RNA.3-201ENST00000362331 103 ntBASIC3.21□□□□□ -1.9
NKX2-2O95096 RNU4-55P-201ENST00000410731 137 ntBASIC3.21□□□□□ -1.9
NKX2-2O95096 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.21□□□□□ -1.9
NKX2-2O95096 MTATP6P18-201ENST00000417994 673 ntBASIC3.21□□□□□ -1.9
NKX2-2O95096 SDCBPP3-201ENST00000419629 891 ntBASIC3.21□□□□□ -1.9
NKX2-2O95096 AC012498.1-201ENST00000424037 437 ntBASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms