Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC098591.2-201ENST00000510152 315 ntBASIC0.47□□□□□ -2.33
USH2AO75445 AC007115.1-201ENST00000546853 234 ntBASIC0.47□□□□□ -2.33
USH2AO75445 MIR4714-201ENST00000580728 77 ntBASIC0.47□□□□□ -2.33
USH2AO75445 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
USH2AO75445 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
USH2AO75445 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC0.47□□□□□ -2.33
USH2AO75445 AC092902.1-201ENST00000486999 259 ntBASIC0.47□□□□□ -2.33
USH2AO75445 XIST_intron.1-201ENST00000619444 68 ntBASIC0.47□□□□□ -2.33
USH2AO75445 RNU6-629P-201ENST00000384061 103 ntBASIC0.47□□□□□ -2.33
USH2AO75445 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.47□□□□□ -2.33
USH2AO75445 AC104806.1-201ENST00000508720 308 ntBASIC0.47□□□□□ -2.33
USH2AO75445 PRELID2P1-201ENST00000552837 301 ntBASIC0.47□□□□□ -2.33
USH2AO75445 AC010928.2-201ENST00000588017 287 ntBASIC0.47□□□□□ -2.33
USH2AO75445 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.47□□□□□ -2.33
USH2AO75445 MIR203B-201ENST00000636080 86 ntBASIC0.47□□□□□ -2.33
USH2AO75445 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
USH2AO75445 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
USH2AO75445 Y_RNA.170-201ENST00000363746 110 ntBASIC0.46□□□□□ -2.34
USH2AO75445 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.46□□□□□ -2.34
USH2AO75445 RNU2-37P-201ENST00000410695 177 ntBASIC0.46□□□□□ -2.34
USH2AO75445 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.46□□□□□ -2.34
USH2AO75445 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC0.46□□□□□ -2.34
USH2AO75445 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.46□□□□□ -2.34
USH2AO75445 ACTR3BP3-201ENST00000565577 979 ntBASIC0.46□□□□□ -2.34
USH2AO75445 AP001180.3-201ENST00000582221 145 ntBASIC0.46□□□□□ -2.34
USH2AO75445 DUXAP9-208ENST00000622815 614 ntBASIC0.46□□□□□ -2.34
USH2AO75445 RNU6-178P-201ENST00000384631 104 ntBASIC0.46□□□□□ -2.34
USH2AO75445 AC096632.1-201ENST00000427395 310 ntBASIC0.46□□□□□ -2.34
USH2AO75445 AL161651.1-201ENST00000440882 223 ntBASIC0.46□□□□□ -2.34
USH2AO75445 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC0.46□□□□□ -2.34
USH2AO75445 snoU13.11-201ENST00000459219 104 ntBASIC0.46□□□□□ -2.34
USH2AO75445 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC0.46□□□□□ -2.34
USH2AO75445 AC091965.2-201ENST00000512324 613 ntBASIC0.46□□□□□ -2.34
USH2AO75445 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.46□□□□□ -2.34
USH2AO75445 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.46□□□□□ -2.34
USH2AO75445 MTND4LP24-201ENST00000572277 291 ntBASIC0.46□□□□□ -2.34
USH2AO75445 YWHAQP7-201ENST00000603536 658 ntBASIC0.46□□□□□ -2.34
USH2AO75445 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.46□□□□□ -2.34
USH2AO75445 RNY4P24-201ENST00000362735 96 ntBASIC0.46□□□□□ -2.34
USH2AO75445 Z75741.2-201ENST00000417272 1167 ntBASIC0.46□□□□□ -2.34
USH2AO75445 HMGB1P9-201ENST00000429856 646 ntBASIC0.46□□□□□ -2.34
USH2AO75445 UBE2V2P1-201ENST00000434717 398 ntBASIC0.46□□□□□ -2.34
USH2AO75445 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.46□□□□□ -2.34
USH2AO75445 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.46□□□□□ -2.34
USH2AO75445 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0.46□□□□□ -2.34
USH2AO75445 AC016877.3-201ENST00000606778 504 ntBASIC0.46□□□□□ -2.34
USH2AO75445 AC008083.4-201ENST00000615076 444 ntBASIC0.46□□□□□ -2.34
USH2AO75445 SNHG22-203ENST00000617833 660 ntBASIC0.46□□□□□ -2.34
USH2AO75445 AC067863.3-201ENST00000624172 122 ntBASIC0.46□□□□□ -2.34
USH2AO75445 AC073544.1-201ENST00000600110 1595 ntBASIC0.46□□□□□ -2.34
USH2AO75445 AC138915.1-201ENST00000565427 1685 ntBASIC0.46□□□□□ -2.34
USH2AO75445 RAB9AP2-201ENST00000443911 597 ntBASIC0.46□□□□□ -2.34
USH2AO75445 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC0.46□□□□□ -2.34
USH2AO75445 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.46□□□□□ -2.34
USH2AO75445 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.46□□□□□ -2.34
USH2AO75445 AC087465.1-201ENST00000560574 245 ntBASIC0.46□□□□□ -2.34
USH2AO75445 AL078605.1-201ENST00000603529 500 ntBASIC0.46□□□□□ -2.34
USH2AO75445 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
USH2AO75445 RNU6-1164P-201ENST00000364428 107 ntBASIC0.45□□□□□ -2.34
USH2AO75445 SNORA51.10-201ENST00000384418 136 ntBASIC0.45□□□□□ -2.34
USH2AO75445 AC073310.1-201ENST00000423226 1033 ntBASIC0.45□□□□□ -2.34
USH2AO75445 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC0.45□□□□□ -2.34
USH2AO75445 AL590233.1-201ENST00000430017 456 ntBASIC0.45□□□□□ -2.34
USH2AO75445 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC0.45□□□□□ -2.34
USH2AO75445 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.45□□□□□ -2.34
USH2AO75445 RPL7P27-201ENST00000403775 720 ntBASIC0.45□□□□□ -2.34
USH2AO75445 AC109780.2-201ENST00000413467 845 ntBASIC0.45□□□□□ -2.34
USH2AO75445 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC0.45□□□□□ -2.34
USH2AO75445 ATG12P2-201ENST00000456830 416 ntBASIC0.45□□□□□ -2.34
USH2AO75445 Y_RNA.654-201ENST00000497848 106 ntBASIC0.45□□□□□ -2.34
USH2AO75445 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC0.45□□□□□ -2.34
USH2AO75445 IGLVVI-22-1-201ENST00000521183 211 ntBASIC0.45□□□□□ -2.34
USH2AO75445 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC0.45□□□□□ -2.34
USH2AO75445 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC0.45□□□□□ -2.34
USH2AO75445 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.45□□□□□ -2.34
USH2AO75445 Y_RNA.100-201ENST00000363141 102 ntBASIC0.45□□□□□ -2.34
USH2AO75445 RNU6-418P-201ENST00000384035 107 ntBASIC0.45□□□□□ -2.34
USH2AO75445 AL139397.2-201ENST00000404529 772 ntBASIC0.45□□□□□ -2.34
USH2AO75445 BLOC1S2P1-201ENST00000428431 301 ntBASIC0.45□□□□□ -2.34
USH2AO75445 USP12PX-201ENST00000432383 1057 ntBASIC0.45□□□□□ -2.34
USH2AO75445 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.45□□□□□ -2.34
USH2AO75445 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC0.45□□□□□ -2.34
USH2AO75445 AC098799.2-201ENST00000509466 868 ntBASIC0.45□□□□□ -2.34
USH2AO75445 RNU6-347P-201ENST00000516658 105 ntBASIC0.45□□□□□ -2.34
USH2AO75445 OR4V1P-201ENST00000525394 1140 ntBASIC0.45□□□□□ -2.34
USH2AO75445 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.45□□□□□ -2.34
USH2AO75445 DUXAP4-201ENST00000603046 613 ntBASIC0.45□□□□□ -2.34
USH2AO75445 AC016590.3-201ENST00000611171 753 ntBASIC0.45□□□□□ -2.34
USH2AO75445 MIR7974-201ENST00000615835 79 ntBASIC0.45□□□□□ -2.34
USH2AO75445 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
USH2AO75445 SNORD95.1-201ENST00000364099 68 ntBASIC0.45□□□□□ -2.34
USH2AO75445 OR1L1-202ENST00000373686 1083 ntBASIC0.45□□□□□ -2.34
USH2AO75445 RNU6-1235P-201ENST00000384559 107 ntBASIC0.45□□□□□ -2.34
USH2AO75445 AL022718.1-201ENST00000412004 84 ntBASIC0.45□□□□□ -2.34
USH2AO75445 RPL17P49-201ENST00000443728 411 ntBASIC0.45□□□□□ -2.34
USH2AO75445 RNU6-498P-201ENST00000459468 107 ntBASIC0.45□□□□□ -2.34
USH2AO75445 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC0.45□□□□□ -2.34
USH2AO75445 RNU1-104P-201ENST00000517280 175 ntBASIC0.45□□□□□ -2.34
USH2AO75445 AC008676.3-201ENST00000521237 435 ntBASIC0.45□□□□□ -2.34
USH2AO75445 AP005435.4-201ENST00000529514 284 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms