Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CPNE3O75131 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.84□□□□□ -1.63
CPNE3O75131 AC139713.2-214ENST00000642059 1811 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 RNA5SP443-201ENST00000363083 132 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 RN7SKP115-201ENST00000363177 317 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 RNU6-379P-201ENST00000363813 104 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 SNORD14B-201ENST00000364533 90 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 Y_RNA.533-201ENST00000384596 114 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 MIR521-1-201ENST00000384902 87 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CPNE3O75131 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CPNE3O75131 Y_RNA.623-201ENST00000411128 95 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 SNORD56-201ENST00000413522 71 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 OR2AM1P-201ENST00000422137 422 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC4.84□□□□□ -1.63
CPNE3O75131 RPL27AP8-201ENST00000424277 446 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 AC092573.2-201ENST00000434546 243 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.84□□□□□ -1.63
CPNE3O75131 Z98949.2-201ENST00000440996 144 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 RPS3AP12-201ENST00000443616 753 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 NDUFB1P2-201ENST00000449477 176 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 OR2AQ1P-201ENST00000451972 200 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 MTCO3P8-201ENST00000453691 755 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 AL583843.1-201ENST00000456070 346 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 snoU13.4-201ENST00000458916 104 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 RNU7-169P-201ENST00000459456 61 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 U8.21-201ENST00000459536 136 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 RN7SL443P-201ENST00000464331 290 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC4.84□□□□□ -1.63
CPNE3O75131 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.84□□□□□ -1.63
CPNE3O75131 RN7SL814P-201ENST00000487715 300 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.84□□□□□ -1.63
CPNE3O75131 RNY3P15-201ENST00000516297 97 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.84□□□□□ -1.63
CPNE3O75131 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.84□□□□□ -1.63
CPNE3O75131 AP000827.1-201ENST00000527814 258 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.84□□□□□ -1.63
CPNE3O75131 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.84□□□□□ -1.63
CPNE3O75131 AC004024.1-201ENST00000549244 247 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.84□□□□□ -1.63
CPNE3O75131 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.84□□□□□ -1.63
CPNE3O75131 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.84□□□□□ -1.63
CPNE3O75131 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.84□□□□□ -1.63
CPNE3O75131 AL158827.2-201ENST00000602494 330 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 AC087783.2-201ENST00000605070 562 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 HMGB1P50-201ENST00000605814 607 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 AC004852.3-201ENST00000614131 326 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 AL355810.1-201ENST00000614629 552 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 AC087385.3-201ENST00000620477 187 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 MIR8062-201ENST00000621515 85 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.84□□□□□ -1.63
CPNE3O75131 AL691447.3-201ENST00000635020 330 ntBASIC4.84□□□□□ -1.63
CPNE3O75131 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CPNE3O75131 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
CPNE3O75131 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
CPNE3O75131 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.83□□□□□ -1.64
CPNE3O75131 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.83□□□□□ -1.64
CPNE3O75131 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CPNE3O75131 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.83□□□□□ -1.64
CPNE3O75131 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.83□□□□□ -1.64
CPNE3O75131 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
CPNE3O75131 RNU6-874P-201ENST00000362390 105 ntBASIC4.83□□□□□ -1.64
CPNE3O75131 RNA5SP428-201ENST00000365129 132 ntBASIC4.83□□□□□ -1.64
CPNE3O75131 RNU6-827P-201ENST00000365553 106 ntBASIC4.83□□□□□ -1.64
CPNE3O75131 Y_RNA.396-201ENST00000383949 103 ntBASIC4.83□□□□□ -1.64
CPNE3O75131 SNORA48.4-201ENST00000391089 134 ntBASIC4.83□□□□□ -1.64
CPNE3O75131 AL022722.2-201ENST00000402519 180 ntBASIC4.83□□□□□ -1.64
CPNE3O75131 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.83□□□□□ -1.64
CPNE3O75131 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.83□□□□□ -1.64
CPNE3O75131 AL049745.1-201ENST00000433953 286 ntBASIC4.83□□□□□ -1.64
CPNE3O75131 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.83□□□□□ -1.64
CPNE3O75131 RPL34P20-201ENST00000442771 351 ntBASIC4.83□□□□□ -1.64
CPNE3O75131 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.83□□□□□ -1.64
CPNE3O75131 RPL21P13-201ENST00000488305 481 ntBASIC4.83□□□□□ -1.64
CPNE3O75131 AC093852.1-201ENST00000503587 266 ntBASIC4.83□□□□□ -1.64
CPNE3O75131 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.83□□□□□ -1.64
CPNE3O75131 AC027369.5-201ENST00000533838 755 ntBASIC4.83□□□□□ -1.64
CPNE3O75131 AC008033.2-201ENST00000542626 177 ntBASIC4.83□□□□□ -1.64
CPNE3O75131 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC4.83□□□□□ -1.64
CPNE3O75131 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.83□□□□□ -1.64
CPNE3O75131 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.83□□□□□ -1.64
CPNE3O75131 AC004584.2-201ENST00000570407 410 ntBASIC4.83□□□□□ -1.64
CPNE3O75131 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.83□□□□□ -1.64
CPNE3O75131 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.83□□□□□ -1.64
CPNE3O75131 MIR1244-1-201ENST00000612829 85 ntBASIC4.83□□□□□ -1.64
CPNE3O75131 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CPNE3O75131 HMGB1P24-202ENST00000615653 685 ntBASIC4.83□□□□□ -1.64
CPNE3O75131 MIR1244-3-201ENST00000635744 85 ntBASIC4.83□□□□□ -1.64
CPNE3O75131 MIR1244-2-201ENST00000636449 85 ntBASIC4.83□□□□□ -1.64
CPNE3O75131 MIR1244-4-202ENST00000636813 85 ntBASIC4.83□□□□□ -1.64
CPNE3O75131 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.83□□□□□ -1.64
CPNE3O75131 AC099654.2-201ENST00000433031 1980 ntBASIC4.83□□□□□ -1.64
CPNE3O75131 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CPNE3O75131 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CPNE3O75131 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CPNE3O75131 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.83□□□□□ -1.64
CPNE3O75131 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CPNE3O75131 MTND5P7-201ENST00000413558 1798 ntBASIC4.83□□□□□ -1.64
CPNE3O75131 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CPNE3O75131 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms