Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 CKS1BP5-201ENST00000434172 273 ntBASIC5.59□□□□□ -1.51
PTCD1O75127 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PTCD1O75127 RPL23AP33-201ENST00000442301 452 ntBASIC5.59□□□□□ -1.51
PTCD1O75127 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.59□□□□□ -1.51
PTCD1O75127 AL121871.1-201ENST00000443413 436 ntBASIC5.59□□□□□ -1.51
PTCD1O75127 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC5.59□□□□□ -1.51
PTCD1O75127 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC5.59□□□□□ -1.51
PTCD1O75127 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.59□□□□□ -1.51
PTCD1O75127 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.59□□□□□ -1.51
PTCD1O75127 SNORD116-26-201ENST00000516006 96 ntBASIC5.59□□□□□ -1.51
PTCD1O75127 RNU6-352P-201ENST00000516908 107 ntBASIC5.59□□□□□ -1.51
PTCD1O75127 RNU6-840P-201ENST00000517275 65 ntBASIC5.59□□□□□ -1.51
PTCD1O75127 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.59□□□□□ -1.51
PTCD1O75127 AC107918.3-201ENST00000533272 382 ntBASIC5.59□□□□□ -1.51
PTCD1O75127 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.59□□□□□ -1.51
PTCD1O75127 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.59□□□□□ -1.51
PTCD1O75127 AC174048.1-201ENST00000603389 144 ntBASIC5.59□□□□□ -1.51
PTCD1O75127 AC104695.3-201ENST00000604052 296 ntBASIC5.59□□□□□ -1.51
PTCD1O75127 AL021997.2-201ENST00000615674 271 ntBASIC5.59□□□□□ -1.51
PTCD1O75127 AC006133.1-201ENST00000617106 264 ntBASIC5.59□□□□□ -1.51
PTCD1O75127 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.59□□□□□ -1.51
PTCD1O75127 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PTCD1O75127 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.59□□□□□ -1.52
PTCD1O75127 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
PTCD1O75127 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.59□□□□□ -1.52
PTCD1O75127 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCD1O75127 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCD1O75127 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTCD1O75127 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
PTCD1O75127 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCD1O75127 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCD1O75127 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCD1O75127 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
PTCD1O75127 DHX9P1-201ENST00000436565 3076 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCD1O75127 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCD1O75127 RNU6-288P-201ENST00000363690 104 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 RNA5SP175-201ENST00000364275 119 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 RNA5SP151-201ENST00000365632 117 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 RNU6-1050P-201ENST00000410388 107 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 RN7SKP202-201ENST00000410439 330 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 RPL7P37-201ENST00000425095 738 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 AL591704.1-201ENST00000432574 275 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 AC090774.1-201ENST00000435925 246 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.58□□□□□ -1.52
PTCD1O75127 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.58□□□□□ -1.52
PTCD1O75127 AC087884.1-201ENST00000469738 328 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 AC128713.1-201ENST00000471495 306 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 RN7SL812P-201ENST00000493791 279 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.58□□□□□ -1.52
PTCD1O75127 SNORA25.10-201ENST00000515926 124 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 RNU1-45P-201ENST00000517191 141 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 AC008694.2-201ENST00000517591 306 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.58□□□□□ -1.52
PTCD1O75127 OR4H12P-201ENST00000556269 907 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 MIR3158-1-201ENST00000583596 81 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 AC091178.1-203ENST00000584586 279 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 AC006157.1-201ENST00000611750 366 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
PTCD1O75127 PLCE1P1-201ENST00000622094 305 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 AL732372.2-225ENST00000642124 456 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 RLIMP1-201ENST00000339626 1680 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCD1O75127 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCD1O75127 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTCD1O75127 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCD1O75127 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCD1O75127 AC083837.1-201ENST00000565297 2994 ntBASIC5.58□□□□□ -1.52
PTCD1O75127 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PTCD1O75127 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PTCD1O75127 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC5.57□□□□□ -1.52
PTCD1O75127 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PTCD1O75127 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTCD1O75127 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PTCD1O75127 AL450326.2-201ENST00000421913 1962 ntBASIC5.57□□□□□ -1.52
PTCD1O75127 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.57□□□□□ -1.52
PTCD1O75127 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.57□□□□□ -1.52
PTCD1O75127 Y_RNA.455-201ENST00000384230 98 ntBASIC5.57□□□□□ -1.52
PTCD1O75127 Y_RNA.463-201ENST00000384271 102 ntBASIC5.57□□□□□ -1.52
PTCD1O75127 Y_RNA.489-201ENST00000384410 101 ntBASIC5.57□□□□□ -1.52
PTCD1O75127 Y_RNA.496-201ENST00000384444 101 ntBASIC5.57□□□□□ -1.52
PTCD1O75127 MIR153-1-201ENST00000384914 90 ntBASIC5.57□□□□□ -1.52
PTCD1O75127 RNU6-328P-201ENST00000390887 106 ntBASIC5.57□□□□□ -1.52
PTCD1O75127 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.57□□□□□ -1.52
PTCD1O75127 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC5.57□□□□□ -1.52
PTCD1O75127 Z74021.1-201ENST00000423610 407 ntBASIC5.57□□□□□ -1.52
PTCD1O75127 RPL7P2-201ENST00000427639 268 ntBASIC5.57□□□□□ -1.52
PTCD1O75127 AC236972.1-201ENST00000433225 199 ntBASIC5.57□□□□□ -1.52
PTCD1O75127 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC5.57□□□□□ -1.52
PTCD1O75127 RPL21P103-201ENST00000479921 488 ntBASIC5.57□□□□□ -1.52
PTCD1O75127 RN7SL817P-201ENST00000480777 288 ntBASIC5.57□□□□□ -1.52
PTCD1O75127 VN1R104P-201ENST00000505115 1009 ntBASIC5.57□□□□□ -1.52
PTCD1O75127 Y_RNA.670-201ENST00000516255 105 ntBASIC5.57□□□□□ -1.52
PTCD1O75127 Y_RNA.721-201ENST00000517207 102 ntBASIC5.57□□□□□ -1.52
PTCD1O75127 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.57□□□□□ -1.52
PTCD1O75127 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC5.57□□□□□ -1.52
PTCD1O75127 AL160290.3-201ENST00000604869 165 ntBASIC5.57□□□□□ -1.52
PTCD1O75127 SDR42E1P2-201ENST00000614861 481 ntBASIC5.57□□□□□ -1.52
PTCD1O75127 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.57□□□□□ -1.52
PTCD1O75127 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms