Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.13□□□□□ -2.23
HMGN4O00479 GNAI2P1-201ENST00000541815 315 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.13□□□□□ -2.23
HMGN4O00479 AC084364.2-201ENST00000546924 395 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
HMGN4O00479 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.13□□□□□ -2.23
HMGN4O00479 AL355877.2-201ENST00000603670 358 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 TUG1_1.1-201ENST00000610654 145 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 AP003399.1-201ENST00000637534 361 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 AC099063.3-201ENST00000642066 185 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.13□□□□□ -2.23
HMGN4O00479 AC091812.1-201ENST00000432235 1948 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 AC008555.8-201ENST00000623602 2168 ntBASIC1.13□□□□□ -2.23
HMGN4O00479 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
HMGN4O00479 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
HMGN4O00479 RNU6-1197P-201ENST00000391183 107 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.12□□□□□ -2.23
HMGN4O00479 CYCSP48-201ENST00000417124 323 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.12□□□□□ -2.23
HMGN4O00479 RPL27AP8-201ENST00000424277 446 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 AIMP1P2-201ENST00000425294 312 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 GTF2IP20-201ENST00000431663 360 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 AC092573.2-201ENST00000434546 243 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.12□□□□□ -2.23
HMGN4O00479 AL353689.1-201ENST00000438895 199 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 FDX1P2-201ENST00000450769 375 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 Z82190.1-201ENST00000454534 490 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 MTND4LP3-201ENST00000468320 276 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.12□□□□□ -2.23
HMGN4O00479 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.12□□□□□ -2.23
HMGN4O00479 AC104057.1-201ENST00000515547 497 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.12□□□□□ -2.23
HMGN4O00479 CYCSP2-201ENST00000558168 301 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 AC015712.3-201ENST00000559380 164 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 MIR4299-201ENST00000577899 72 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 MIR5571-201ENST00000577998 113 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.12□□□□□ -2.23
HMGN4O00479 AC005034.5-201ENST00000604219 466 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 AC021749.1-201ENST00000604322 607 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 AC073413.2-201ENST00000604332 360 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 AC025588.2-201ENST00000604851 466 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 AL391813.2-201ENST00000609113 322 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 uc_338.12-201ENST00000616344 181 ntBASIC1.12□□□□□ -2.23
HMGN4O00479 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.12□□□□□ -2.23
HMGN4O00479 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.12□□□□□ -2.23
HMGN4O00479 ADAM3A-203ENST00000461344 2157 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 RNU4-23P-201ENST00000362839 140 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 RNU4-42P-201ENST00000364738 142 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 RNU6-1226P-201ENST00000384317 107 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC1.11□□□□□ -2.23
HMGN4O00479 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.11□□□□□ -2.23
HMGN4O00479 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC1.11□□□□□ -2.23
HMGN4O00479 AC016691.1-201ENST00000441321 413 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 AC124916.1-201ENST00000444020 547 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 MTND2P19-201ENST00000449129 1012 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.11□□□□□ -2.23
HMGN4O00479 AC108210.2-201ENST00000503681 201 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.11□□□□□ -2.23
HMGN4O00479 PCNAP1-201ENST00000505363 709 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 SNORA31.13-201ENST00000516624 135 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 SNORA48.10-201ENST00000516965 160 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 SCARNA11.3-201ENST00000517276 130 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 AC008676.3-201ENST00000521237 435 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 AP004247.1-201ENST00000531556 1289 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.11□□□□□ -2.23
HMGN4O00479 RPS3AP4-201ENST00000555161 764 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 AC023158.1-201ENST00000561632 1025 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 AC024619.4-201ENST00000580924 316 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 AC023043.2-201ENST00000589678 1026 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 AC136601.2-201ENST00000604356 474 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 AC025754.2-201ENST00000606491 432 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 AC106052.1-201ENST00000608029 497 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 AC135803.1-201ENST00000608748 565 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 AC010329.5-201ENST00000623497 2174 ntBASIC1.11□□□□□ -2.23
HMGN4O00479 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
HMGN4O00479 SNORA7.1-201ENST00000363750 139 ntBASIC1.1□□□□□ -2.23
HMGN4O00479 RNU6-955P-201ENST00000410497 104 ntBASIC1.1□□□□□ -2.23
HMGN4O00479 RNU6-1328P-201ENST00000410938 106 ntBASIC1.1□□□□□ -2.23
HMGN4O00479 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.1□□□□□ -2.23
HMGN4O00479 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
HMGN4O00479 BX322784.1-201ENST00000455793 1077 ntBASIC1.1□□□□□ -2.23
HMGN4O00479 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.1□□□□□ -2.23
HMGN4O00479 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
HMGN4O00479 AC091965.2-201ENST00000512324 613 ntBASIC1.1□□□□□ -2.23
HMGN4O00479 RN7SKP179-201ENST00000516126 217 ntBASIC1.1□□□□□ -2.23
HMGN4O00479 SCARNA17.1-201ENST00000516211 143 ntBASIC1.1□□□□□ -2.23
HMGN4O00479 SCARNA17.2-201ENST00000516334 143 ntBASIC1.1□□□□□ -2.23
HMGN4O00479 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.1□□□□□ -2.23
HMGN4O00479 AP005639.2-201ENST00000527592 928 ntBASIC1.1□□□□□ -2.23
HMGN4O00479 HSBP1P1-201ENST00000555205 166 ntBASIC1.1□□□□□ -2.23
HMGN4O00479 AC010615.3-201ENST00000597319 394 ntBASIC1.1□□□□□ -2.23
HMGN4O00479 AC116312.1-201ENST00000606841 314 ntBASIC1.1□□□□□ -2.23
HMGN4O00479 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.1□□□□□ -2.23
HMGN4O00479 AC016252.1-201ENST00000609721 474 ntBASIC1.1□□□□□ -2.23
HMGN4O00479 SCARNA17.4-201ENST00000614296 143 ntBASIC1.1□□□□□ -2.23
HMGN4O00479 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
HMGN4O00479 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms