Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 AC234064.1-201ENST00000436312 247 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 RPS26P56-201ENST00000444468 240 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 SUMO2P6-201ENST00000505273 288 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 SNRPGP16-201ENST00000533275 226 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 CENPUP2-201ENST00000555897 1186 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 AC138915.2-201ENST00000569776 97 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 AC092474.3-201ENST00000603022 568 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 AP002371.2-201ENST00000624450 503 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 U6.101-201ENST00000637707 76 ntBASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.37□□□□□ -2.19
COL6A6A6NMZ7 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AP002907.1-201ENST00000606361 1430 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 CDC27P3-201ENST00000635418 1910 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 TATDN1P1-201ENST00000414123 891 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AC092447.6-201ENST00000414578 210 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 PSMA2P3-201ENST00000429685 675 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 MTND2P29-201ENST00000438595 412 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AC002542.1-201ENST00000440683 193 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 RPL7P55-201ENST00000450522 746 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 HMGN3P1-201ENST00000453847 193 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 BX248409.1-201ENST00000455497 255 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 RPL32P14-201ENST00000463196 378 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AC093752.1-206ENST00000511823 336 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 RNU6-885P-201ENST00000516607 104 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 CR383656.7-201ENST00000548164 174 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AC125611.1-201ENST00000549563 229 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 NIFKP8-201ENST00000560500 874 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AC008687.2-201ENST00000597865 520 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AL606834.3-201ENST00000602615 496 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 RNU6-1192P-201ENST00000612197 107 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 RNU6-489P-201ENST00000618289 107 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AL138955.1-201ENST00000622881 1040 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AC004808.1-201ENST00000627671 721 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 RNU6-730P-201ENST00000383954 104 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 MIR153-1-201ENST00000384914 90 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 SNORD65C-201ENST00000390962 71 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 RNU2-28P-201ENST00000410457 189 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AC073264.1-201ENST00000411508 416 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 HMGN2P19-201ENST00000425149 265 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 RPS6P14-201ENST00000425165 719 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AP000949.1-201ENST00000438328 629 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AL034418.1-201ENST00000448675 860 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 NF1P3-201ENST00000457709 450 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AC108729.2-201ENST00000476543 840 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 MTCYBP37-201ENST00000510642 1133 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AP003355.1-201ENST00000518956 587 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 IGJP1-201ENST00000522682 475 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AC084851.1-201ENST00000529105 249 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 MIR3912-201ENST00000577566 105 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AL020997.3-201ENST00000602843 359 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AP003973.1-201ENST00000604639 691 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AC091946.2-201ENST00000606105 291 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 uc_338.9-201ENST00000617424 182 ntBASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.36□□□□□ -2.19
COL6A6A6NMZ7 AL136520.1-201ENST00000600311 1322 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 ZNF37BP-203ENST00000452306 1352 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 RNU6-50P-201ENST00000362356 103 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 RNU6-444P-201ENST00000383988 108 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AL133264.1-201ENST00000407157 562 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 MIR1250-201ENST00000408098 113 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 PNRC2P1-201ENST00000423940 420 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 ZNF736P6Y-201ENST00000447526 1213 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms