Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AC093155.1-201ENST00000440164 826 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AL118520.1-201ENST00000450770 291 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 MTATP6P7-201ENST00000453315 681 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AC114786.4-201ENST00000508771 728 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AC114797.1-201ENST00000514003 728 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AC027338.1-201ENST00000514840 825 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AC022447.1-201ENST00000515358 464 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 SCARNA15.2-201ENST00000516409 127 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 RNU6-1256P-201ENST00000516539 103 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AP005902.1-201ENST00000521358 186 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AP003066.2-201ENST00000529375 555 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AC124947.2-202ENST00000552735 133 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AL391261.3-201ENST00000557194 520 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AC068313.1-201ENST00000604028 1008 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AC107214.2-201ENST00000608204 634 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AL136981.2-201ENST00000617319 734 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 MIR219B-201ENST00000637023 88 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 AC080128.1-201ENST00000474389 1917 ntBASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
TRAV41A0A0B4J266 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 ZNF720P1-201ENST00000562403 1939 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 SNRPEP3-201ENST00000338402 276 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 RNU6-253P-201ENST00000384730 105 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 AC092634.2-201ENST00000428146 1010 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 AL049734.2-201ENST00000441066 616 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 MOB1AP2-201ENST00000446060 614 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 DDX3P2-201ENST00000446138 111 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 RPL39P6-201ENST00000448289 150 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 AC244505.3-201ENST00000454598 187 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 AC108734.3-201ENST00000481241 1165 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 RPS27P21-201ENST00000486977 252 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 TMEM251P1-201ENST00000503717 318 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 RNU6-1261P-201ENST00000517194 104 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 OR8K2P-201ENST00000524645 927 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 AP002748.2-201ENST00000528671 348 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 CYCSP26-201ENST00000534107 320 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 MIR4648-201ENST00000580107 72 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 AC120053.1-201ENST00000607706 736 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 AL512506.1-201ENST00000613918 449 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 AC078880.5-201ENST00000617845 421 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 AC253576.2-201ENST00000618815 580 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 MKKS-204ENST00000639674 192 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 AC104454.1-201ENST00000421341 1401 ntBASIC1.64□□□□□ -2.15
TRAV41A0A0B4J266 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 MIR506-201ENST00000384998 124 ntBASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 SNORD65.1-201ENST00000390889 71 ntBASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 U3.40-201ENST00000408706 208 ntBASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 AC092047.1-201ENST00000424997 240 ntBASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 SRIP2-201ENST00000428470 166 ntBASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 RPL17P35-201ENST00000432217 549 ntBASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 OR10R1P-201ENST00000441524 1141 ntBASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 PIGFP3-201ENST00000441918 722 ntBASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 AC090515.1-201ENST00000465295 476 ntBASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 GZMAP1-201ENST00000503054 631 ntBASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 MTCO2P9-201ENST00000503214 694 ntBASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 AC138853.1-201ENST00000503549 823 ntBASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 SNRPGP1-201ENST00000553864 222 ntBASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 MIR5571-201ENST00000577998 113 ntBASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms