Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
GPC6Q9Y625 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
GPC6Q9Y625 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
GPC6Q9Y625 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
GPC6Q9Y625 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 RNU6-1167P-201ENST00000363227 94 ntBASIC5.05□□□□□ -1.6
GPC6Q9Y625 SNORA17A-201ENST00000391185 133 ntBASIC5.05□□□□□ -1.6
GPC6Q9Y625 RPS29P13-201ENST00000402041 169 ntBASIC5.05□□□□□ -1.6
GPC6Q9Y625 RN7SKP293-201ENST00000411389 296 ntBASIC5.05□□□□□ -1.6
GPC6Q9Y625 AL592148.1-201ENST00000413568 445 ntBASIC5.05□□□□□ -1.6
GPC6Q9Y625 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.05□□□□□ -1.6
GPC6Q9Y625 TMEM167AP1-201ENST00000423409 219 ntBASIC5.05□□□□□ -1.6
GPC6Q9Y625 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 MTATP6P4-201ENST00000427725 675 ntBASIC5.05□□□□□ -1.6
GPC6Q9Y625 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
GPC6Q9Y625 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 RPL23AP45-201ENST00000476406 468 ntBASIC5.05□□□□□ -1.6
GPC6Q9Y625 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 EDDM3DP-201ENST00000554692 434 ntBASIC5.05□□□□□ -1.6
GPC6Q9Y625 AC040958.1-201ENST00000561102 201 ntBASIC5.05□□□□□ -1.6
GPC6Q9Y625 MIR4643-201ENST00000577473 78 ntBASIC5.05□□□□□ -1.6
GPC6Q9Y625 MIR3614-201ENST00000581261 86 ntBASIC5.05□□□□□ -1.6
GPC6Q9Y625 PRPF19P1-201ENST00000584766 898 ntBASIC5.05□□□□□ -1.6
GPC6Q9Y625 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 AC244107.2-201ENST00000611773 76 ntBASIC5.05□□□□□ -1.6
GPC6Q9Y625 AC011476.5-201ENST00000615594 130 ntBASIC5.05□□□□□ -1.6
GPC6Q9Y625 AL691477.1-201ENST00000624398 162 ntBASIC5.05□□□□□ -1.6
GPC6Q9Y625 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 SNORA17.5-201ENST00000630429 132 ntBASIC5.05□□□□□ -1.6
GPC6Q9Y625 AC243829.7-201ENST00000633081 225 ntBASIC5.05□□□□□ -1.6
GPC6Q9Y625 OR51H2P-202ENST00000641424 3046 ntBASIC5.05□□□□□ -1.6
GPC6Q9Y625 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
GPC6Q9Y625 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
GPC6Q9Y625 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.04□□□□□ -1.6
GPC6Q9Y625 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
GPC6Q9Y625 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GPC6Q9Y625 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
GPC6Q9Y625 AC005332.5-201ENST00000591222 2919 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GPC6Q9Y625 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
GPC6Q9Y625 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GPC6Q9Y625 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.04□□□□□ -1.6
GPC6Q9Y625 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.04□□□□□ -1.6
GPC6Q9Y625 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
GPC6Q9Y625 MIR411-201ENST00000362239 96 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 Y_RNA.123-201ENST00000363338 102 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 SNORD113-8-201ENST00000363497 74 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 RNA5SP240-201ENST00000365355 128 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
GPC6Q9Y625 OR1L6-202ENST00000373684 1044 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 RNU6-937P-201ENST00000384325 106 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 MIR153-1-201ENST00000384914 90 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 SNORA12.2-201ENST00000391040 156 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 SNORD58.1-201ENST00000391313 66 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC5.04□□□□□ -1.6
GPC6Q9Y625 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.04□□□□□ -1.6
GPC6Q9Y625 RPL19P16-201ENST00000433839 588 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 AC093414.1-201ENST00000434712 514 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.04□□□□□ -1.6
GPC6Q9Y625 AL390119.1-201ENST00000440329 312 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.04□□□□□ -1.6
GPC6Q9Y625 RN7SKP210-201ENST00000459176 261 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
GPC6Q9Y625 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.04□□□□□ -1.6
GPC6Q9Y625 RNA5SP360-201ENST00000516555 118 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.04□□□□□ -1.6
GPC6Q9Y625 AC021006.3-201ENST00000530771 192 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.04□□□□□ -1.6
GPC6Q9Y625 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.04□□□□□ -1.6
GPC6Q9Y625 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.04□□□□□ -1.6
GPC6Q9Y625 AC012616.1-201ENST00000600294 197 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.04□□□□□ -1.6
GPC6Q9Y625 FO393422.1-201ENST00000603908 708 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC5.04□□□□□ -1.6
GPC6Q9Y625 RNA5SP440-201ENST00000612665 119 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 RN7SL787P-201ENST00000613000 284 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 AL161629.2-201ENST00000615347 275 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 U2.14-201ENST00000615943 113 ntBASIC5.04□□□□□ -1.6
GPC6Q9Y625 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GPC6Q9Y625 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
GPC6Q9Y625 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GPC6Q9Y625 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
GPC6Q9Y625 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.03□□□□□ -1.6
GPC6Q9Y625 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms